Amphiprion ocellaris (clown anemonefish): 111588742
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Entry
111588742 CDS
T06018
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111588742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111588742
03036 Chromosome and associated proteins [BR:
aoce03036
]
111588742
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
111588742
Coactivators
SAGA/TFTC/STAGA complex
111588742
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
111588742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
111588742
NCBI-ProteinID:
XP_023155045
Ensembl:
ENSAOCG00000006652
LinkDB
All DBs
Position
8:25180925..25195671
Genome browser
AA seq
869 aa
AA seq
DB search
MDGAAGITSAAAPSVTAAQSPSKPGAAGGVVMVVPDATSAVGKPGVTGVQTLNGSAVVMS
CHIPRIGPADSNSSQPAVTLVSNGPVSVSKGGATVLSATPSTIIRTTLSAQNAVTSSVIS
SQPSAKTVPTVTLVRPPMQSPTNTSHSAGNPSTVLTTPAVSVTSTAGAHVVVSAVATGTT
ATMRSPTVLQNLRTSVPSTIAASPPGGIRAIAPQVLAPRLTQPQQNATNIQNIQLPAGMV
LVRSESGQLLMIHQQTLAQMQAQSQSQSAMASRPAAPTSTPPVQITSLQAPGASLLARPV
TPTTIIKQGSTVQTTVTATTTLQRPPVLQNTIMMGGTASATGQPLGTPTTVQPGSAATAV
TQRVGPFGATGTPVAPIAITAETLENVKKCRNFLSTLIKLASSGKQSSETTANVKELVKN
LLEAKIEPEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQMTPDSEAFIKESLLAQPSTQ
PAAAASTALTAVVLRPPLSTAITTATSTATTKTTVISLTQTPHSKPGLIVPQQQGTMVRP
QVTLAQSPMVTLRGQTHSRIIVGQPQVVKQLQTVPAVKQTLAPGAKTVQVLSQASLTAAQ
KNKLKEAGGGTFRDDDDINDVASMAGVNLSEESARILATNSELVGIVTRSCKDETFLSTS
SLTRMALEIGKKFGVSELGTDVINYISHATQQRLQNLLEKVSQVAQQRNVTFKEDNRSEQ
VSDVRTQLKFFEELDQMEKQRKEEQEREILLKAAKSRSRQEDPEQLRLKQKAKEMQQQEL
AQIRQREANLTALAAIGPRKKRKMDSPLRGASAEGSGSGPSQPGGSGGTGSRQFMRQRIT
RVNLRDLLFCLENEKGTSHSHLLYKGFLK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atggatggggcagccgggatcacatcggcggcggcaccgagtgtgacagctgctcagagt
ccgtcaaagccgggtgcagctggcggagttgttatggtggtaccagacgcgacatctgct
gttgggaaacctggagtgactggtgttcaaactttgaatggaagcgcggtggtgatgagc
tgtcatatccccagaattggacctgcagacagcaacagctcgcagcccgctgtcacgctt
gtcagcaacggacctgtttctgtgagcaaaggaggcgcaacggttttgtctgcgacaccg
agtactattattcgaactactttgagtgcgcaaaatgctgtgacttcctctgtgatttcg
tctcagccctctgcgaaaactgtacccacagtcacgcttgtgaggccacctatgcaaagt
cccaccaacacttcacacagcgcaggcaatccatccacagttttaacaacaccggccgtc
agtgtgacaagtacggctggtgcccacgtcgtggtttcagctgttgcgacagggacgaca
gcgactatgaggagcccgactgttttgcaaaacttgaggacttctgtaccgtcaacaatc
gctgcctctcctccgggtggaatacgtgctattgctccacaggttttggctcctcgactc
actcagcctcaacaaaacgccacaaatatccaaaacattcagctccctgcaggcatggtc
ctggttcgcagtgagagtgggcagctgctgatgattcaccagcagactttggctcagatg
caggctcagtcccagtcacaaagcgccatggcatcaagacctgcagcccccaccagcact
ccacctgtccagatcacttctctacaggctccaggtgcatcactgttggctcgtccagtt
acccccaccaccatcattaaacaaggttccacagtccaaacgactgtgacagccaccacc
acgctgcagaggcctcctgtgcttcagaacaccatcatgatgggaggaactgccagtgcc
acgggtcagccgcttggaacacccaccacagtgcagcctggatctgcagccacagcagta
acacagagggtggggccctttggggccactgggacccctgtcgctccgatagctatcaca
gctgaaacactggagaatgtgaaaaagtgtagaaactttctgtccacactgatcaagctg
gcatccagtggaaaacagtcctctgagactacggccaacgtcaaggagctcgtcaagaac
ctgctggaagcaaagatagagcctgaagatttcaccagtagattataccgggagctcaac
tcctcaccgcagccgtaccttgtacctttcctcaagagaagtctcccagcactgcgtcag
atgaccccagactcagaggcctttatcaaggaaagcctgctggctcagccgagcactcag
cctgctgcggcagcttccacggcgctcactgccgtagttctgcgacctcctctgtccacc
gccatcactacagccaccagcactgccacgaccaaaacaacagttatcagcctcactcag
acacctcacagtaaacctggactgatagtgcctcagcaacaggggaccatggtgaggccg
caagtgacgctggctcagtctcccatggtaacactcagaggacaaacccatagccgcatc
attgtgggccagccacaggtggtcaaacagctacaaacagttccagcagtaaagcagacg
ttggctccaggggccaaaacagtacaagtactcagtcaggcttctctcactgctgctcag
aagaacaagctgaaggaagctggagggggaactttcagggatgacgatgatatcaacgac
gtggcctccatggcaggagtcaacttgtcagaggagagtgcccgtatcttagcaaccaac
tctgagcttgttggcatagtgactcgttcctgtaaggacgagaccttcctctccacctct
tcactcacccggatggccctggagattggtaagaagtttggtgtcagtgagttgggcaca
gatgtgatcaactacatttcccacgctacacagcagcgactacaaaacctcctggaaaaa
gtgtcacaagtggcacagcagaggaacgtaaccttcaaggaggacaaccggagtgagcag
gtcagcgatgtgcgaactcagctcaaattctttgaggagctggatcagatggagaagcaa
aggaaggaagagcaggagagagagatcctcttgaaggctgccaagtctcggtcacggcaa
gaagacccagagcagcttcgactgaaacagaaggccaaagagatgcagcagcaggagctg
gctcagatcagacagagagaagccaacctaacagcactggcagcaattggcccgaggaaa
aaacggaaaatggactctcctcttaggggtgccagtgcagagggctcagggtcaggcccc
tcccaacctggaggctccggtggaacaggctccagacagtttatgcgacagcgcatcact
agagtgaacctcagggacctgctcttctgtctggagaatgaaaaggggaccagtcactca
cacctgctctataaaggcttcctcaaatag
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