Amphiprion ocellaris (clown anemonefish): 111588753
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Entry
111588753 CDS
T06018
Symbol
smarcc2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111588753 (smarcc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111588753 (smarcc2)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111588753 (smarcc2)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111588753 (smarcc2)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111588753 (smarcc2)
PBAF complex
111588753 (smarcc2)
GBAF(ncBAF) complex
111588753 (smarcc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
111588753
NCBI-ProteinID:
XP_023155068
Ensembl:
ENSAOCG00000006548
LinkDB
All DBs
Position
5:25487721..25501770
Genome browser
AA seq
1081 aa
AA seq
DB search
MAVRKKDGGPNVKYFEASDTVSQFDNVRVWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGRHVSNPPLTKLPMKCFLDFKSGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLTRPVIYLSPDIEPKLLGKLKDIIKRHQGSVTEDKASSSHVVVP
IPTSLEEEEWVRPVMKRDKQVLLHWGYFPDSYDTWIPASEIEAAVEDPPSPEKPRKVHAK
WILDLDQYNEWMNEEDYEVGEGCPKRKRISAKTLTDEVTTPDERRDKKPGSAKKRKRSPS
PSPTPPPQESKKKNTKKGPTTPYTKSKRGQREEEQEDLSKDLDEASPVAASEEGNPAKTN
NTKKDSDSTPVKGGTDMDEQEDESMETTGKEEEEGSPSVKGEPVKGSDLHEDNVTEQTHH
IIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTS
TACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSESRPTPMGPPPTSHFHVLADTPSSLVP
LQPKTSQVRVNSHKHTNRHSHTNSRLLYICPSFTVALQTPATQQMMSFPDKVKDKPADLQ
NFGLRTDMYSKKTGTAKSKNAASSMRDWTEQETLLLLEGLEMYKDDWNKVSEHVGSRTQD
ECILHFLRLPIEDPYLEDTSSTLGPLAYQPIPFSQAGNPVMSTVAFLASVVDPRVASAAA
KSALEEFSRMKEEVPAALVEAHVRRVEEAARVSGRQDPLYGLEGSGIAGTGLEEGERPDE
SSDESKSDSQSSEEKREAKDSKDGAIEEEEKQAENGKKEEERGREPEGEREADKTESEMG
DGEKDKDGKEGAEEGQREGESEGERKAKVERDVGEGNLATAAASALAAAAVKAKHLAAVE
ERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADRQSFHMEQLK
YAEMRARQQHFQQIQHQQHSQAGGPHSNQAASGPPAQGVAASQPAPSTPAPQPAPSPAPP
ASSAPASESQPPQGAHTSPPCPPGQAPAAHSSSSTTPVLHESSTPLPGETLHPSAPVPPP
Q
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaagacggcggcccgaatgtaaaatatttcgaagcgtctgatacc
gtttctcagtttgataatgtccgcgtctggctgggaaagaattacaaaaagtacatccag
gctgagccccccaccaacaagtctctgtccagcctggtggtccagctgctccagttccag
gaggaggtgtttggtcgacatgtcagcaaccctcctcttaccaagttacctatgaagtgt
tttctggacttcaagtcaggaggggctctctgccacatcctggctgctgcctacaagttc
aagagtgaccaaggatggcgcaggtttgacttccagaatccgtcgaggatggaccgaaat
gtggagatgttcatgacgattgagaagtccttagtgcagaacaactgcctgactagacct
gtcatctacctaagccctgacatagagccaaaactgctcgggaaactgaaagacatcatc
aaaagacatcagggctcagtgactgaagacaaggcctccagctcccatgttgttgtgccc
attcccaccagtctggaggaagaggagtgggtgcgccctgtgatgaagagagataagcaa
gtgctgctccactggggatattttcctgacagctatgacacctggatcccagccagtgaa
attgaggctgcagtggaggatcctcccagcccagaaaagcccaggaaggtccatgcaaag
tggattttagacctggaccagtacaatgagtggatgaacgaggaggattatgaggtggga
gagggctgtcctaagagaaagaggatctctgccaagaccctgacagacgaggtgaccaca
cctgatgagaggagggacaagaagcccggcagcgccaagaaaaggaagcgctcgccgtct
ccttccccgacccctccgcctcaggagagcaagaagaagaacaccaaaaaagggccaacg
accccgtacaccaagtctaaacggggccagagggaggaggaacaggaggatctgtctaag
gacctggatgaagcatcacctgttgcagcatctgaagagggaaacccagcaaagacaaac
aacactaagaaggattctgattcaactccagtgaagggagggacagatatggatgagcaa
gaagatgagtcgatggaaacaactggaaaggaagaggaggaaggatctccgagtgtaaag
ggggaaccagtgaaaggttcagaccttcatgaggacaatgtgactgagcaaacccaccac
atcattatcccgagctacgctgcctggtttgactacaacagtgttcatgccattgaacgc
agagccctgccagagttctttaatggaaagaacaaatccaaaacccctgagatctatctg
gcctacaggaacttcatgattgacacctaccgactgaaccctcaggagtatctgacctcc
accgcctgccgtaggaacctggcaggagatgtatgtgcgatcatgagagtccacgccttt
ctggagcaatggggactcatcaactaccaggtggactctgagagccggcccacacccatg
ggtcctccacccacctctcacttccatgtcctggcagacactccttccagtcttgtgccc
ctgcagcccaagacgtcccaggtccgtgtaaactcacataaacacacaaatagacacagt
cacacaaattctaggttgctttacatttgcccctctttcactgtggccttgcagacccct
gccacccagcagatgatgtcattcccagataaagtgaaggacaagccggcagatctgcaa
aactttgggctgcggaccgacatgtacagcaagaagactggcactgcaaagagcaagaat
gcagcaagttccatgagggattggacagagcaagaaacactactactacttgagggcttg
gagatgtacaaggatgactggaacaaggtgtctgaacatgtgggcagccgtacacaagat
gagtgcatcttacactttctgcggctgcccattgaggacccgtacttggaggacacctct
tcgactctgggcccactggcttaccagccaatacctttcagtcaagctggaaaccctgtc
atgagcaccgtggccttcctcgcctccgtagtcgacccacgtgtggcttcagctgcagct
aaatctgcacttgaggaattttctcgtatgaaggaggaggttcctgcagcgcttgttgag
gctcatgtgcggcgagtggaggaagcagcgagggtcagcggcagacaggatcccctgtat
ggcctggagggcagcggcatcgcaggcactggcctggaggagggagaaaggcctgatgaa
agcagtgatgaaagtaagagtgacagccaatcaagtgaggagaagagagaggccaaggac
agcaaagatggagcgattgaggaggaggagaagcaggcggagaatggaaagaaggaagag
gaaagaggaagagaaccagaaggagagagagaggcagacaaaacagagtctgaaatgggt
gatggagagaaggacaaggatggaaaagagggagcagaggagggacaaagagagggggag
agtgagggagaaaggaaggctaaggtggagcgtgatgttggagaaggaaacctggcaaca
gctgctgcctccgctctagcagctgctgctgtcaaagccaagcatctggctgcagtggaa
gagaggaagatcaaatctctggtggctctgctggttgagacccaaatgaagaagcttgag
attaaactgcgacacttcgaagaactggaaaccatcatggacagagagcgggaggctttg
gagtatcagcggcagcagctgctggctgaccgtcagtccttccacatggagcagctgaaa
tacgctgagatgagggctcgccagcagcacttccagcagattcagcaccagcagcacagc
caggccgggggtcctcattccaaccaggcagcctcaggcccgccagcccaaggggtagct
gcaagccagccagctcccagcacaccagcgccgcagccggcccccagccctgcaccacca
gcctcctctgccccggcctctgagtcccagcctccccagggcgctcacacctcacccccc
tgtcccccaggccaggccccggctgctcactccagctccagcactacacctgtactccac
gagtccagcacccctctccctggggagacgctccacccttcggctccagttcctcctccc
cagtga
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integrated database retrieval system
