Amphiprion ocellaris (clown anemonefish): 111588881
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Entry
111588881 CDS
T06018
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111588881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111588881
Cell adhesion molecules [BR:
aoce04515
]
Immunoglobulin superfamily
NGL family
111588881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
111588881
NCBI-ProteinID:
XP_023155239
Ensembl:
ENSAOCG00000027070
UniProt:
A0AAQ5YVS1
LinkDB
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Position
1:40097100..40156678
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AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLAVVKPSSF
TGLVNLQKLWMMHAQVQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKETVPANTSCCARCHTPTVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIEPPGDDSQTPLPPFGWVS
SSTTKGTPISTRTTERTYTIPVLDLDGEGSPNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAMERHLSLPPLEHYNHYNTYKSTYHH
PPMLSTIHSSATQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatctcctccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctctccaaccccctctttgtgctgcttttggcccttcagatcctggtggtggct
gggctggttcgtgctcagacctgtccctccgtctgctcatgcagtaaccaattcagcaaa
gtcatatgcacccgccgcagcctccgagacgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggataacctcattcaggtcatcaaggtggacagtttcaaacacctg
cgccatctggagatcctgcaactgagcaagaatcatatccgcagcatcgaaattggcgcc
ttcaatggactggccagtctcaacacgttggagctctttgataatcggctcacgacaatc
cccaatggagcattcgagtacttgtccaagctgaaggaattgtggctacggaacaacccc
atcgaaagtataccatcttatgccttcaaccgggtcccctcgcttcgaaggctggatcta
ggtgagctcaaacgtctgtcctacatttctgacggagctttcaaggacctgagcaacctg
cgctacctgaacctgggaatgtgcaacctcaaggagatccccaacatcttacctttggtc
aggcttgaggagctagaaatgtcaggtaaccagctcgctgttgtcaagcccagctcattt
acagggttagtgaacctccagaagctgtggatgatgcatgcccaagtccaaaccatcgag
aggaactccttcgatgaccttcagtcgctggtggagctcaacctggctcacaacaacctt
acctttctaccgcatgacctcttcacgccgttgcatcgcctggagcgggtccacctgcac
cacaacccctggaactgcaactgtgatattctgtggctcagctggtggctgaaggaaaca
gtacccgccaacaccagctgctgtgcacgctgccatactcctacagtctttaaagggcgc
tacattggagaactggaccacagctactttcagtgcgatgttcccgttattgtggagcca
cccagtgacttaaatgtgacagaaggcatgggggcggagcttaaatgtcgcaccagctcg
ctgacctccatcagttggctcacaccaaacggctctctggtgactcatggggcttataag
gtgcgtttgtctgtactcaatgacgggaccctgaactttaccagcgtcacaatgcaggac
actgggacttacacctgcatggtaagcaacacggcgggcaacatttctgcctccgccgtg
cttaatgtcacctctgtggaaaacagcggggtgacctacttcaccacagtcaccgtggag
accatcgagcccccgggggatgacagccaaacaccgcttccacctttcggctgggtgtca
tcgtcgacgacaaaaggcactcccatttccacaaggaccacagagcggacttacaccatt
ccagttctggatctggacggagaaggatcccccaacggcctggacgaggtcatgaaaacc
accaagatcatcatcggctgcttcgtggccatcacgctcatggccgccgtcctgctggtt
attttctacaagatgaggaagcagcataaccagcaggatcccgacgggccggcctcctcc
atggaggtgatcacggtggaggaagagctggcgggtgtcgctgctatggagagacaccta
tcgctgccccctctggagcattacaaccactacaacacctacaagagcacttaccaccac
cctcccatgctcagtaccatacacagctcagccacacaggaacctttactgattcaagcc
tgctcaaaagacaacgtacaagagacccagatctga
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