Amphiprion ocellaris (clown anemonefish): 111588962
Help
Entry
111588962 CDS
T06018
Symbol
cnot10
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111588962 (cnot10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111588962 (cnot10)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111588962 (cnot10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_14
TPR_7
TPR_8
ARM_TT21
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
111588962
NCBI-ProteinID:
XP_023155371
Ensembl:
ENSAOCG00000023741
LinkDB
All DBs
Position
9:36022043..36055384
Genome browser
AA seq
742 aa
AA seq
DB search
MAENTEQNEAKHESSPSPGMTDQEKEIAASAYEAFLAGQYDESLKHLEALQEVNKEDYKI
TMNRAVVEFYKSDQTTTGMLKQTLMAMKNQVHTSAEDVDGLDDVENSLLYYNQAIIHYHL
RQYSEAISIGEKLYQFLEPFEEKFAQAVCFLLVDLYLLTFQPEKSLHLLAVLEKLSVQGS
NKNGKGENNSSNKEGANQKAEFAAVIEAAKSKMHQYKVRAYIQMKSSKACKREIKSVMNT
AGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHAGPIKTGECVRCMFWNNLGCIHFA
MGKHNLGIFYFKKALQENDHTCAQLGDGNSGQSKKFTGIPMCALLANKRYELLYNCGIQL
LHIGRPLAAFECLMEAVQVYHSNPRLWLRLAECCISANKGGSEQENKGLPCKKGIVQSIV
GQGYHRKIILASQSTQNTVYSEGQSAAIPVASMEFAAICLRNALLLLPEHQQQDIKTENS
SKSSSQSGSTESGSENSDACSGKGQDADKFLSAAPSSPLRKQEVENLRCSILACSAYVAL
ALGDNLMALNHAEKLLHQTKVSGSLKFLGHLYAAEALISLDRISDAIAHLNPENVSDVLM
GILTSDQDQAGSDKGDEPVESSGKQTPLCYPSSVTSARAMMLFNLGSAYCLRSEYEKARK
CLHQAASMVNTKEIPPEAILLGVYLELQNGNTQLALQIIKRNQLLPLVVQRVSPDSGKKP
IQPFQSVNPIQLPSSFTQVQRK
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatacagagcaaaacgaggcaaagcatgagagctcaccatcccctgggatg
acagaccaagagaaagaaattgcagcgagtgcatatgaagcgtttttggctggacagtat
gatgaatctctcaaacaccttgaagccctgcaggaggtcaacaaagaggactacaagatc
accatgaatagggctgttgttgaattttacaaaagcgatcagactaccacagggatgctg
aagcaaaccctgatggcaatgaagaaccaggttcacacatcagcagaggatgttgatgga
ttggatgacgttgaaaatagtttgctgtactataatcaagccatcatccactatcatctg
cggcagtactctgaggccatctcaataggagagaagctctaccagtttctggaaccattt
gaagagaagtttgctcaggctgtgtgcttcttgctggtggatctctacctactcaccttc
cagccagagaagtccctccatctgctggctgtgctggaaaaactttctgtacaaggaagc
aacaagaacggcaaaggggagaacaacagttcaaacaaagagggagccaaccagaaggct
gagtttgcagccgtaattgaagcagccaaatccaaaatgcaccagtacaaagtgagagcc
tacattcagatgaaatcttccaaggcctgtaaaagggaaatcaaatcagtgatgaacaca
gcgggaaattctgcaccctcactcttcctcaaaagtaactttgagtatctgagaggaaac
taccggaaagcagtgaagctactgaacagctctaacattgcagagcatgctggacccatc
aagacaggtgaatgtgtacgatgtatgttctggaacaatctgggctgcatacactttgca
atggggaaacacaacctaggcattttctacttcaagaaggcgctgcaagaaaacgaccac
acctgtgcacagctgggagatggcaacagtgggcaatcgaaaaaattcacaggcatcccc
atgtgtgctttactagccaacaaacgctatgagctactgtataactgtggtattcagctg
ctgcacattggcaggcctctggcagcatttgagtgtctgatggaagcagtgcaggtatac
cactccaaccctagactctggctgcggcttgcagaatgctgcatctctgccaacaaaggg
gggtcagagcaagaaaacaaaggtttaccttgtaaaaaaggaatcgttcagtcaattgtt
gggcagggctaccatcgcaagatcattctggcatcccagtctacacagaatactgtctac
agtgagggacagtcagcagctatcccagtagccagtatggagtttgcagctatttgcttg
aggaatgctctgctgctgctgcctgaacaccagcaacaggacatcaagacagagaacagc
tccaaaagctccagtcagtcaggaagcactgagagcggaagcgagaacagtgatgcctgc
agtgggaaaggtcaggatgctgataaatttctgtctgcggcgccatcatctcctctaaga
aaacaggaggtagaaaacctcaggtgctccatcctggcctgtagtgcctatgtggcgttg
gcgttgggagacaatctgatggctctaaaccatgctgagaaactactccatcaaactaag
gtgtcaggatccctcaagtttctaggtcacctatatgctgctgaagccctgatctctttg
gacagaatctctgatgctattgcgcacctcaacccagagaacgtcagcgatgtgttaatg
gggattctgaccagcgaccaagaccaagcagggtctgacaaaggagatgagcctgtcgag
tcctcagggaagcaaactcccctgtgttaccccagcagcgtgacatcagctcgggccatg
atgctcttcaacctgggtagtgcttactgcttgaggagtgagtatgagaaggcccgcaag
tgtctgcatcaggcggcatcaatggtgaacaccaaggagattccacctgaagccatcctg
ctgggagtgtatctagagctacagaatggaaacactcagctggccctgcagatcatcaaa
cggaaccagctgctgcctttggtagtccagagggtctccccagactccggcaagaaaccc
atccaaccctttcagtctgtcaatcccatccagttgccctcatccttcacacaagttcag
cgtaaatga
DBGET
integrated database retrieval system
