Amphiprion ocellaris (clown anemonefish): 129347244
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Entry
129347244 CDS
T06018
Symbol
sox2
Name
(RefSeq) transcription factor Sox-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
129347244 (sox2)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129347244 (sox2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129347244
NCBI-ProteinID:
XP_054874327
Ensembl:
ENSAOCG00000031034
LinkDB
All DBs
Position
2:17048133..17050458
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AA seq
321 aa
AA seq
DB search
MYNMMETELKPPAPQTNTGGTGNTNSTGTGTNQKNSPERVKRPMNAFMVWSRGQRRKMAQ
ENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMK
KDKYTLPGGMLAPGGNGMGPGISVGGTGLGGGVNQRMDSYAAHMNGWTNGGYGMMQDQLS
YQHPGLNAHNPSQMQSMHRYDMSALQYNSMTSTQSYMNGSPTYSMSYSQQTTPGMTALGS
MGPSSVVKSESSSSSPPVVTSSSHRAAPGCQSGDLRDMISMYLPGAEVSEQSAQTRLHMS
GHYQSTVPGTTINGTLPLTHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggagactgaactgaagcccccagctccccagaccaacacggggggc
acgggcaacaccaactcgacaggtaccggcaccaaccagaaaaacagtccggagcgggtc
aagagacccatgaacgcgttcatggtgtggtctcggggccagaggaggaagatggcgcaa
gaaaatcccaaaatgcacaactcggagataagcaagaggctgggcgcagagtggaaactt
ctgtcggagagcgagaagagacctttcatcgacgaagccaagaggctgcgggccctgcac
atgaaggagcacccggattacaaataccggccccggcggaaaaccaagaccctcatgaag
aaggacaagtacaccctgcccggcgggatgctggctccgggagggaacgggatgggaccc
gggatcagtgtcggggggaccgggctgggcggtggggtgaaccagcggatggacagctat
gcggcgcacatgaacggctggaccaacgggggctacggcatgatgcaggaccagctgagc
taccagcacccggggctcaacgcgcacaacccgagccagatgcagtccatgcaccgctac
gacatgagcgccctgcagtacaactccatgaccagcacccagagctacatgaacggctcc
ccgacatactccatgtcctactcccaacaaaccacgccgggaatgaccgccctgggctcc
atggggccctcctcggtggtgaagtccgagtccagcagctccagcccgcccgtcgtcacc
tcatcgtcccaccgggccgccccgggctgccaaagcggagatctgagggacatgatcagc
atgtacctgcccggggcggaggtcagcgagcagagcgcccagaccaggctacatatgtcc
gggcactaccagagcaccgtgcccgggacgacgatcaacggcacgctgccgttaacacac
atgtaa
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integrated database retrieval system
