Amphiprion ocellaris (clown anemonefish): 129347496
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Entry
129347496 CDS
T06018
Symbol
taf4b
Name
(RefSeq) transcription initiation factor TFIID subunit 4B
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129347496 (taf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
129347496 (taf4b)
03036 Chromosome and associated proteins [BR:
aoce03036
]
129347496 (taf4b)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
129347496 (taf4b)
Coactivators
SAGA/TFTC/STAGA complex
129347496 (taf4b)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
129347496 (taf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129347496
NCBI-ProteinID:
XP_054860930
Ensembl:
ENSAOCG00000021907
LinkDB
All DBs
Position
2:31133695..31152794
Genome browser
AA seq
705 aa
AA seq
DB search
MATNKGVIEGQKLESCGAARDGDSSLQVRILQVPAKCGPVSAVQPPPSAAGISKGDCVPP
KVISSGQSYQPPSSSVCTIPGSHTSPRSIMVVAKAATPAKVSATSQQVAKQALSQVASLN
QVTTPGRTMVIAVPRSAAPQPVAPRPPQTASAQLPANIQIPPGMMLIRSDSGQLMLVSQQ
ALAQAQQGPRAVSGQAPRILASPVSAAAGGKSNEKVTVIRMAAPSSFQPAPVQKTAVVIG
VAPKPAVVQTLNAASERGSHPRIQTATTETKKDPPPTFSQETLESVKKCKNFLVTLIKLA
SSDSRSADMANNVRGLVRSLLEGKVEAEEFTEQLYDELKSTPQPCLVPFLKKSLPAVRCL
TADPQLFIQQASTSIRNPTSLSSTVKPSSTDLRTSQQGVQQARGVTLRPGLTTFTQSRHY
VYKRGGPAPRHTVVQSGKHFAGAFSVKQGFTQDPPHSSKSACKDSLGSYKEDDDINDVAS
MAGVNLREENAQILTTMVGSVVQSCQDQLFLSPHPVLSRILHTGQALGVTDVGPEVVALV
SHATQECLRGLLEKLTVIAEHRKAALKEDQWHAKESDVRSQLRFLEEIESLKKKRKDEEE
RERLLRLARSRSHTEDPQHQQLKQRAKELQQMEEAQLQQREANLHALAAIGPRKKRPLDM
MESQVPLLPRQGVHRVTRVMLKDLLACMEQERFLRHSLILYKAML
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaataaaggggtcattgaaggccaaaagctggagtcctgtggtgcagccagg
gatggagactcctctcttcaagtcaggatattacaggtcccagccaaatgtggacccgtc
agtgcagtgcagcctccaccatctgctgcagggatctcaaaaggtgactgtgtcccaccg
aaagtcatctccagtggccagagctaccagcctccctcctcctctgtatgtacaatccca
ggctctcacacttcccctcgttccatcatggtggttgcaaaggcagccactccagcaaag
gtgagtgctactagccaacaggtagcaaaacaggctctcagccaggtggcctccttaaac
caggtcacaactcccggaagaacgatggtcatagctgtgcccagatcagcagctccacag
ccggtcgcccctcgaccaccacagactgcttctgcacagctaccagccaatatccagata
ccaccaggtatgatgttaatccgcagtgacagtggtcagctgatgctggtatcccagcag
gctttggctcaggctcaacagggaccaagagctgtcagtggtcaagcaccaagaatactg
gcatcaccggtatctgcagcagctggaggtaaaagtaatgagaaggtgactgtgatccgg
atggcagctccctcaagtttccagccagcaccagtccaaaagacagctgtggtgattggt
gtggcacccaaaccagctgtggttcagactctcaatgctgcgtctgagcgggggagccat
cctcgcattcaaacggccaccacagaaaccaaaaaggatccaccacccacgttcagtcag
gagaccctggaaagtgtgaagaagtgcaagaacttcctggttactctgatcaagctggct
tcaagtgactccaggtctgccgacatggcaaacaatgtcagaggactggtcagaagtctg
ctggaagggaaggtggaagcagaggaatttacagaacagctctatgatgagttgaagtcg
actccgcagccctgcctggtgccttttctaaagaaaagtcttccagcagttcgctgcctt
accgcagaccctcagttatttatccaacaggcttcaacttccatccgcaaccccacatct
ctgtcttccaccgtgaagccatccagcacagacctgaggaccagccagcagggtgttcag
caggctcgaggagtgactctgaggcctgggttgacgacattcacccagtcaagacattac
gtgtataagagaggtggacccgcccccagacacacagtggtccagtcaggaaaacacttt
gcaggagctttttcagtaaagcagggcttcactcaggatccacctcattcctccaaatct
gcatgcaaggacagtttaggatcttacaaagaagatgatgacattaatgatgtcgcctcc
atggctggggtcaacctcagagaggagaatgcacagatcctgaccaccatggtcggctct
gtggtgcagtcatgccaggatcagctgttcctgtcacctcacccggtgctcagccgaatc
cttcacacaggacaggcactgggagtaactgatgtgggtccagaggtggtggctctggtg
tctcatgctactcaggagtgtcttcgtgggttgctggagaagctcactgtgattgctgaa
caccgcaaggctgccctgaaggaggaccagtggcatgctaaagagagtgatgtgcgctct
cagctccgcttcctggaggaaattgaaagtttgaagaagaagaggaaagatgaagaggaa
agagagcgactgctgcgtttggccagaagtcgctcacacactgaggatccacagcatcag
cagcttaaacaaagagccaaagagctacagcaaatggaagaagctcagctgcagcaaaga
gaagccaacctccacgcactggctgccatcgggcctcgcaagaagagacccctggatatg
atggaaagccaggtgcctctgctgcccaggcagggtgtccacagagtgactcgggtgatg
ctgaaggacctgctggcctgtatggagcaggagcgcttccttcgtcactccctcattctc
tacaaagcgatgctgtga
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