Amphiprion ocellaris (clown anemonefish): 129348072
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Entry
129348072 CDS
T06018
Name
(RefSeq) cGMP-gated cation channel alpha-1-like isoform X1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
129348072
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
129348072
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
129348072
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Presenilin
Sec62
MDM10
DUF3043
Tim54
CDC45
GmrSD_N
NPR3
PFF1_TM
ALMT
DUF2207_C
CLN3
Mat89Bb
SLC52_ribofla_tr
RR_TM4-6
DUF2828
POP1_C
RPN2_C
Menin
Motif
Other DBs
NCBI-GeneID:
129348072
NCBI-ProteinID:
XP_054863409
Ensembl:
ENSAOCG00000019826
LinkDB
All DBs
Position
23:complement(26400359..26411879)
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AA seq
652 aa
AA seq
DB search
MAKVAPLAPPITARLTPPTIILQDMEKAEPADVRVVQTETPAVLFNVNNSNNNEDEEEKK
KKKKEKKERKEKKEKEKQDKKERKEKKQKEEKEKEKEKEKKEKEKEKAKEEPPKEITVID
PAGNTYYHWLFIITVPVMYNWTLIIARACFEELQTDYLVYWFLLDLLSDLVYLGDMVFRT
RTGYLEQGLLVKDELKLRERYMNSFQFKLDLASMVPTDVLYVVFGLKYPEIRLNKLLRFN
RMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAIGFGADRFVYPDPSD
PEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIVGNVGSM
ITNMNAARADFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVLKYLPD
KLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYII
KEGKLAVVADDGIKQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLFCLSKD
DLMEALTEYPDAKAMLEEKGRQILMKDGLLDLEVAAQGPDPKEIEEKVDCMTGTLDVLQT
RYARLLAEHEATHSKLKHRVTRLEMKMAPPPRADQPVDAPPPETEPTKEEKK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagttgctccattggccccgcccatcactgccagattgactccgcccaccata
attttgcaggacatggagaaggcggagccagctgacgtccgggttgtccagacagaaact
ccagcggttctgttcaacgtcaacaacagcaacaacaatgaggacgaggaggagaagaag
aagaagaagaaggagaagaaggagaggaaagaaaagaaggagaaagaaaaacaggacaag
aaggagagaaaggagaagaagcagaaggaggagaaagagaaagaaaaagaaaaggagaag
aaggaaaaagagaaagagaaggccaaggaggagcctcctaaggagatcacagtgatcgat
ccagcaggaaacacctactaccactggctgttcatcatcactgttcctgtcatgtacaac
tggacgctcatcatcgccagggcgtgtttcgaggagctgcagaccgactacctggtctac
tggttcctcctggacctcctgtccgacctcgtctacctgggcgacatggtgttcagaacc
aggaccggttacctggagcagggtttgctggtgaaggacgagctgaagctccgtgagcgc
tacatgaacagtttccagttcaagctggacttggcctccatggttcccaccgatgttctg
tacgtcgtcttcggcctcaaatacccggagatccgcctcaacaaactgctgcgattcaac
aggatgttggagttcttccagcggacagagaccagaaccaactaccccaacgctcttcgt
atttccaacctggtcatgtacatcgtcatcatcatccactggaacgcctgcctctactac
tccttctccaaggccatcggttttggtgccgacaggttcgtgtatccggacccgtcggac
ccagagttcggtcgtctggtgaggaagtacgcctacagcatgtactggtccacgctgacg
ctgaccaccatcggagaaacaccgccccctgtggagaactccgagtacttcttcgtcgtc
acggacttcttggtcggcgtcttgatcttcgccaccatcgtcggtaacgtcggctccatg
atcaccaacatgaacgctgccagagccgacttccaggctcgcatcgacgccatcaagcag
tacatgagcttccggaaggtaaccaaggacctagagaagcgagtgatcaagtggttcgac
ttcctgtggaccaataagaaagcggtggacgagagggaggtgctgaagtacctgccggac
aaactgagggctgagattgccatcaacgtccacctggacacgctgaagaaggtccggatc
ttcgccgactgcgaggccgggctgctggtggagctggttctgaagctgcagccgcaggtc
tacagtcccggagactacatctgcaagaagggcgacatcggccgcgagatgtacatcatc
aaggagggcaagctggccgtggtcgccgacgatggcatcaagcagttcgtggtcctcagt
gacggaagctacttcggcgagatcagcatcctggccatcaagggcagtaaagcaggaaac
agaaggacagcgaacatccgcagcatcggctactccgacctcttctgtctctccaaagac
gacctgatggaggcactgaccgagtatccggatgccaaggccatgctggaggagaagggg
aggcagatcctgatgaaggacgggctgctggacctggaggtggcggcgcagggtcccgac
ccgaaggagatcgaggagaaggtggactgcatgacgggaacgctggacgtcctgcagacc
cgctacgcccgactgctggccgagcacgaggccacgcacagcaagctcaaacaccgagtc
acccggctggagatgaagatggcgccgccgccgagggccgaccagccggtggacgccccg
cccccagagacggaacccaccaaagaagagaagaagtag
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integrated database retrieval system
