Amphiprion ocellaris (clown anemonefish): 129349020
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Entry
129349020 CDS
T06018
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04110
Cell cycle
aoce04218
Cellular senescence
aoce04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129349020
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129349020
04218 Cellular senescence
129349020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
129349020
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
129349020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
129349020
NCBI-ProteinID:
XP_054866948
Ensembl:
ENSAOCG00000026958
LinkDB
All DBs
Position
5:1720916..1746617
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AA seq
1071 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRKSLETLCQELNMDEQTAAEAMDNFTGIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRSSKLSLIQFFSKMKKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRPD
GHVSSDEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLFQKQILKGNEELLTEMLD
PQNFIDNNKAMNREYEEYVLTVGDFDERVFLGADADEEIGTPRKIIQETTVSQTTAQNQL
QQHVEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVGRLQSMVAGLRTAPSDHLMQI
FKSCSRDPTESILARVKILGQTFKEHYTNDSDDTPGSHIDFAENRLKLAEILYYKILENV
MVQETKRLQGRDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIISIFKLAPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLESRAWTADSALWSALQVAGNKVPTVEEVNFSS
SLDTGSGSGSFSSGSTVQSHLPLVALSPIIHPRIREFRSGLGSARKDMPPSPLSVHDRYS
SPAAGSAKRRLFGDDPPAPSPGLNPSGSPMPSPAKRLTFGSSSTLKIGAQGTQTTVLSIP
LQGMNNDRTITLIPVQPCDSSAAVTAQFLLTASPSRIATIPAPAAAMTSDPQTGSGRPRR
TGSVALFFRKVYHLASVRLRDLCVKLDISSELRGKIWTCFEHSLVHSTDLMKDRHLDQLL
LCSIYIISKITKETHTFQDIMKCYRSQPQASSHVYRSVLLRHTPREQVADENMEVDSVSG
GESAEKTNQLPGDANSNQSVEEERGDLIQFYNSVFVLKMKSFALRYAIHDNRADAPPLSP
FPSVRAQPLSPRRVSQRHSLYVSPHKNSAGCLTPNSYTYRINSSPSKELSDINRMIRQGC
VSRKRAFTMEGDVMMSSACDSPSKRACPENGSSPDVLLKRLQDVVSERQSH
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaggagtcgtcggattcggagtcggggaggatggaggagagctcggtgcgg
aagagcctggagacgctgtgtcaggagctgaacatggacgagcagactgccgctgaagcc
atggacaacttcaccggcatctggaacacctacactctggagggggaggtggtgcactgg
ctggcctgttcgctgtacgcagcctgcaggaagggctccactcccacagtgggtaaagga
ctgatggagggaaactgcgtctccctcactaggatccttcgctcgtccaaactcagtctg
atccagttcttctccaagatgaagaagtgggccgacatgtccaacctctcgcaggacttc
aggctacgaatggatcgactggagcgaaactttgaggtctccaccgtgatcttccgcaag
tttgagcccatcttcatggacatgtttcagaatccacagggaggagagccgccgcgacag
ccacgcagcaggaaacacaggcggctgccctgtcacatcagtgatgtgttcaagttctgc
tggactctgtttgtctacaccaaagggaacttccgtatgatcggtgacgacctggtgaac
tcgtaccacctgctgctctgctgtctggacctggtgtttggaaacgctctgctgtgtgcc
aacaggaaggacctcatcaacccgacgttcagaggtctgcctgctctgtaccgccctgac
ggccatgtttcctctgatgaacctcctccatgtgtgttggagaggctgtgtgagctgcat
gacgggctggtggtggaggccaagggcatcaagcagcactacttcaaaccctacatacag
aagctcttccagaaacagattctgaaaggaaacgaggagcttttgacagaaatgttggat
cctcagaacttcattgacaacaataaagccatgaacagggagtacgaggagtacgtgttg
acggtgggagacttcgatgaaagagtgtttctgggagctgatgctgacgaggaaatcgga
acgccgaggaagatcattcaggaaacaactgttagccaaacaacggcacagaaccagctg
cagcagcacgtggagaagtccggctctctcgccccctccactcctctaacgggacgagtc
tacctgaaggagaaggacctgctcgtcacgcccgtttcctcggcaacgcaaagtgtgggc
cgactgcagagcatggtggccggtctgaggacggcacccagcgaccacctgatgcagatc
ttcaagtcctgctccagagatcccacagagtccatactggctcgagtcaagattctggga
caaaccttcaaagaacattacaccaacgactcagacgatacgcctggctctcatatagac
tttgcagagaaccgtctgaagctggcggagatactctactacaagatcctggagaacgtc
atggttcaggagaccaaacggctgcagggcagagacatgagtgttttactggagcaggac
atcttccactgctccctgatggcgtgctgtctggaggtggtgctgttttcgtacagctcc
cagaggaccttcccatggatcatcagcatcttcaaactggctccgttttacttcttcaag
gtgatcgaggtgtttatccgctcagaggaaggcctgtccagagacatggtgaagcatctg
aactcaattgaggagcaggtcctggagagtagagcgtggactgcagactctgccctgtgg
agcgccttgcaggttgctgggaacaaagttcccacagtggaggaggtgaatttttcctcc
agtcttgacactggctctggttctggctccttcagttctggttccacagttcagtcccac
cttcccctggtggccctctctcccatcatccaccctcgtatcagggagttcagatcaggc
ctgggcagtgcacgtaaagatatgcctccgtctccgctgtcggtccatgacaggtacagc
tctcctgcggccggcagcgctaagcggcgtctcttcggtgacgaccctccggctccatct
ccaggcctcaaccccagcgggagccccatgccgtctccagccaagaggctgacgtttggc
tccagcagcaccctgaagatcggagcacaggggacccagaccaccgtcctgagcatcccg
ctgcaagggatgaataatgaccgcaccatcacgctgatcccagtccagccatgtgactcc
tctgctgccgtcaccgctcagttcctgctgactgcctcccccagccggatcgccaccatc
ccggcccccgctgctgccatgacctccgacccccagacaggaagtggacggccgcgacgc
accggatcagtggctctgttcttcaggaaggtgtaccacctggccagtgtacgtctcagg
gatttgtgcgtgaagctggacatctcgtcggagctgagagggaaaatctggacgtgtttc
gagcattctctggtccactctaccgatctgatgaaggaccgacaccttgaccagctgctg
ctgtgcagcatttacatcatatccaaaatcactaaagagacgcacaccttccaggacatc
atgaagtgttaccggagccaaccacaggccagcagccacgtgtaccgcagcgtcttactg
cgtcacactcccagagagcaggtagctgatgaaaatatggaggtggattctgtttcaggt
ggagaatctgcagagaaaaccaatcagctcccaggagatgcaaactccaaccaatcagtg
gaggaggagcgtggagacctcatccagttctacaacagcgtgtttgtcctgaagatgaag
agctttgcactgcgatacgccatccacgataaccgggctgacgctcctcctctctctccg
ttcccgtcggtccgggctcagcctctttctcctcgcagagtctctcaaagacactcgctg
tacgtctcccctcacaagaactcagcaggctgcctcaccccgaactcctacacctacagg
atcaacagcagcccgtccaaggaactgtcagacatcaaccggatgatccggcagggctgc
gtgagcaggaagagggccttcactatggagggggatgtgatgatgtcatcagcgtgcgac
tcccccagtaagagggcgtgtccagagaacggcagcagtccagatgtgctgctgaagcgt
ctgcaggacgtcgtgtcggagaggcagagtcactga
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