Amphiprion ocellaris (clown anemonefish): 129349275
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Entry
129349275 CDS
T06018
Symbol
ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022
Basal transcription factors
aoce03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
129349275 (ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
129349275 (ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
129349275 (ercc2)
03036 Chromosome and associated proteins [BR:
aoce03036
]
129349275 (ercc2)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
129349275 (ercc2)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129349275 (ercc2)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
129349275 (ercc2)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
129349275 (ercc2)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
129349275 (ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129349275
NCBI-ProteinID:
XP_054867959
Ensembl:
ENSAOCG00000024894
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All DBs
Position
7:complement(33142626..33157598)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNIEGLLVYFPYDYIYPEQYSYMLELKRTLDAKGHGVLEMPSGTGKTISLLSLIVAYQ
RAFPLDVTKLIYCSRTVPEIEKVVEELRKLMEFYAKETGERNNFLALALSSRKNLCIHPE
VSSLRFGKEVDGKCHSLTASYIRAQRHVNPNQPVCRFYEEFDAVGRQVPLPAGIYNLDDL
KDFGRRKGWCPYYLARYAILHANIVVYSYHYLLDPKIADLVSKELAKKSVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQNNVDTLQNTIQKIKETDAAKLREEYRRLVEGLKEANVARE
TDIYLSNPVLPDEILKEAVPGTIRTAEHFVGFLRRFLEYLKSRLRVHHVVQESAPQFLKD
IFDKVCIDRKPLRFCAERLQSLLRTLEIADIADFSAVTLISNFATLVSTYSQGFTIIIEP
FEDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIYPRILDFRPVTMAS
FTMTLARTCLCPLIVGRGNDQVALSSKFETREDFAVIRNYGNLLLEMSAVVPDGIVAFFT
SYVYMENIVASWYEQGILENIQRNKLIFIETQDAAETSMALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMIFADKRYARADKRGKLPRWIQEHINDGSLNLTVDETVQLSKHF
LRQMAQPFRQEDQLGLSLLTLEQLESEEMLQKITQIAHQT
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacatcgaaggtctgctggtgtattttccttatgactacatctatcctgag
cagtactcctacatgctggagctgaagaggactctggacgccaagggccatggagtcctg
gagatgccgtcaggaacagggaaaaccatctccctgctgtctcttatcgttgcctatcag
agggcctttcctttggatgtgaccaagttaatttactgctccagaacagttccagagatc
gaaaaggttgtggaagagctcaggaagttgatggagttttatgccaaagaaactggagag
aggaacaacttcttggctctggctctttcctccaggaagaacctctgcatccaccctgag
gtgagctctctgcgcttcggtaaggaggtcgatgggaagtgtcacagtctgacggcatcg
tacatccgagcacagcgtcacgttaaccccaaccagcccgtgtgtcgcttctacgaggag
ttcgacgccgtcggccgtcaggttcctcttccagctggaatctacaacctggacgacctg
aaggacttcggcaggaggaagggatggtgtccttattacctggctcgctatgcgatcctt
catgctaacatcgtggtctacagttatcactacctgctggaccctaagatcgctgacctg
gtgtccaaagagctcgccaagaaatctgtggtggtgtttgatgaggctcataatatcgac
aacgtttgcatcgactccatgagtgtgaacatcaccagacgaacactggaccgctgccag
aacaacgtggacacgctgcagaacaccatacagaagataaaggaaacagacgccgctaag
ctgagggaggaataccgacggctggtggagggactgaaggaagccaacgttgccagggag
acggacatctacctttcaaacccggtgttacctgatgaaattctgaaagaggccgtccct
ggtacgattcgaacagccgaacactttgttggattcctgagacgtttcctggagtatctg
aagtcccgtctgagggtccaccatgtggtgcaggagagcgccccccagttcctcaaagac
atcttcgacaaagtctgcatcgaccgcaaacctctcaggttttgtgcagaacgtttgcag
tcgctgctacgaactctggagatcgccgacatcgcagacttctcagctgttactctcatc
tccaactttgctaccctcgtcagtacctacagccaaggttttacgattattattgagccc
tttgaagacagaactccaaccatcgccaacccggtgctgcacttcagctgtatggatcca
tctatagccatcaaaccagtttttcaaaggtttcagtcagtcatcatcacctcggggact
ctctctccactggacatctatcccagaatcctcgactttcgccccgttaccatggcgtcc
ttcaccatgacactggcacggacctgcctctgtcctctgattgtcggacggggaaacgat
caggtggctctaagctccaagtttgaaaccagagaagactttgctgtgattcgtaactat
ggcaacctacttctggagatgtccgccgtggttcctgacgggatcgtggcgtttttcacg
agctacgtctacatggagaacatcgtggcgtcctggtatgaacagggcatcctggagaac
atccagaggaacaagctgatcttcatcgagactcaggacgcagcagagaccagcatggct
ctggagaaatatcaggaggcttgtgagaacggcagaggagccatcctcctttctgtggcc
agaggaaaagtgtctgaaggaatagatttcgtgcaccattttggccgagcagtcatcatg
tttggagttccttatgtttacactcagagccgcatcctgaaggctcggctggagtacctt
cgggatcagtttcagatccgagagaacgacttcctgacgtttgatgccatgcgtcatgct
gctcagtgtgtcggcagagccatcagaggaaagaccgactatggactcatgatttttgct
gacaagcgttacgcccgagcggacaaacgagggaaacttcctcgctggattcaggagcac
atcaacgacggcagtctgaacctcaccgtggacgagaccgtgcagctctccaagcacttc
ctgcgacagatggctcagcccttcagacaggaggaccagctgggtctgtctctgttgaca
ctggagcagctggagtcggaggaaatgctgcagaaaattactcagattgctcatcagacc
tga
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