KEGG   Amphiprion ocellaris (clown anemonefish): 129349812
Entry
129349812         CDS       T06018                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04382  Cornified envelope formation
aoce04510  Focal adhesion
aoce04512  ECM-receptor interaction
aoce04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129349812
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    129349812
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129349812
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    129349812
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aoce04147]
    129349812
   00536 Glycosaminoglycan binding proteins [BR:aoce00536]
    129349812
Exosome [BR:aoce04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   129349812
Glycosaminoglycan binding proteins [BR:aoce00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   129349812
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 129349812
NCBI-ProteinID: XP_054870278
LinkDB
Position
10:complement(16209305..16221284)
AA seq 1232 aa
MFDYYCEPGYPGDPGDVGPKGLPGNKGPSGIKGCPGECECRSGVGNVGPPGPIGFPGPPG
LPGPEGLKGDPGLKGGDGLRGPPGFQGIPGLKGRKGQKGDFFGIGFKGVKGDGGIPGYSG
PPGGIGSPGPDGAPGPVGDPGPPGAGYTGLPGPKGDPGATGRKGLPGPAGLPGSYFPGPK
GAPGPKGNQGFPGSPGIPGRPGPPGETETCCEEDETGPPGRKGEPGSPGIPGAPGREGPL
GTPGHSGPKGIKGDDGVTGGIGLPGHPGLNGDPGDPGASGINLSGPPGAPGLPGHQGRKG
EPGDAFSSRPGAPGPPGLRGATGKGGLPGTPGNPGSPGIQGPNGRPGRKGEPGPQGDPGP
TGLPGLPCTECDLRGLPGPPGPPGNPGPSGASGFFGQKGLKGDIGPPGHGRTGPQGFPGP
PGLPGPVGPRGPSGPPGDPGPNGWPGVKGERGYPGRPGTRGLPGLPGPPGPNGVQGERGL
NGRPGDPGYPGPPGHKGSRGEPGLPGASTIANIIKGFPGPSGLRGPPGQQGFQGSKGRRG
DPGDLGPDGLPGQAGFKGIPGGPGRSGRPGPPGYPGAKGFPGSGGHPGHSGDPGEPGPLG
NIGIPGLPGFPGAKGDPGQTFGQPGAPGPKGLPGEDGPRAPTGSPGDPGDPGYRGRPGQP
GQPGFPGEPGGEGLPGFPGPRGPSGLPGFPGPPGDEGGVGPLGPPGPFGPPGPPGPPGLD
GLNGLEGPVGMKGAHGVDIPGPQGPDGFPGAKGLRGPQGPPGTTYAVSKGPRGPTGDTGF
PGSPGSPGYAGKLCQTPLPGSYGEIGYEGPPGPPGPHGEPGAPGSTSILSKGDPGPVGLP
GLPGRKGSKGLPGPSGLSNNPGPSGPRGETGPSGPRGPPGSKGPPGVPGPQGRKGDTGPA
GNRGVKGARGDSINGYPGPAPRGLPGPPGHAGSVGFVGDVGPPGTPGRNGEKGPKGTVGL
PGRPGPPGRNGPVGDPGNVGEQGFTGPEGIPGVPGDPGLPGHSGAIRSGFMLVIHSQSIL
VPVCPSGSSQLWVGYSLIYLEGQEKAHTQDLGQPGSCLPVFSTMPFSYCNKAACHYSSRN
DKSYWLSTTAPMSMMPLFGTEIRAHISRCVVCETAAPAVAFHSQDQSVPPCPAGWRSLWT
GYSFLLHTGAGDEGGGQSLTSSGSCLKDFRTYPFIECQGARGSCHYFANLYSFWLTTVSW
TEQFTTATPDTIKAADQQRRKASQCNVCLRQL
NT seq 3699 nt   +upstreamnt  +downstreamnt
atgtttgactactactgtgagcctggttaccctggagaccctggtgatgttggacccaaa
ggacttcctggaaacaaaggccccagcggaattaaaggttgtccaggagaatgtgaatgt
aggtctggtgtggggaatgtaggacctcctggtccaattggttttccagggcctccaggt
ttacctggaccagaaggacttaagggggacccaggactgaaaggaggggacggactaaga
ggaccaccaggatttcaaggaattcctggtctaaaaggccgaaagggtcagaaaggtgac
ttttttgggataggttttaaaggtgtcaagggtgatggaggaatccctggatattcaggt
cctcctggaggtattggtagcccaggaccggatggtgcccctggccctgtgggagaccct
ggaccaccaggtgctgggtatacaggattgcctggtcccaaaggtgacccaggcgctacg
ggacgcaaaggattaccaggacctgcaggtctcccaggtagttattttccaggaccaaag
ggagcacccggacctaaaggaaatcaggggtttcccggctcaccagggattcctggacga
ccgggccctccaggcgaaacagagacatgctgcgaagaagatgagactggccctcctggc
cgtaagggtgaaccaggttcaccaggaattccaggtgcacctggaagagagggaccgctg
ggaactcctgggcactcaggccctaaaggcattaaaggagatgacggtgtaacaggaggg
attggactgccaggacatccaggtttaaatggggatccgggtgaccctggtgccagtgga
attaatctgagtggccctccaggtgctcctggcttacctggacaccaaggcagaaagggt
gaaccaggagatgctttctcttccaggccaggtgctcctggcccacctggcctccgtggg
gccacagggaaaggtggcctgcctggtactcctggaaacccaggatcaccaggtatccaa
ggcccaaatggacgaccaggccgtaaaggagagccaggtcctcagggtgaccctggaccc
actggcctcccaggcctaccctgtactgaatgtgacctgagaggtctgccaggacctcca
ggacctcctggaaaccctgggccgagtggagcatctggcttctttggtcagaagggtctg
aagggggatataggtccgcctggtcatggacggacgggtccacaagggtttcctggtcct
cctggtttgccaggtcctgttggaccaaggggcccctctggcccaccaggagatcctgga
ccaaatggctggcctggagtgaaaggtgaaaggggataccctggcaggcctgggacaaga
ggcttaccaggccttcctggacctccaggaccgaatggtgtacaaggagagaggggtttg
aatggtcgcccaggtgacccaggatatccaggacctcctggtcataaaggttcacgggga
gaaccaggactacctggagcatcaactattgcaaatataatcaaaggcttcccgggacct
tcaggactaagggggccaccgggccagcaaggatttcaaggatcaaagggcagaagggga
gatccaggtgatttaggtcctgatggattgcctggccaggcaggttttaaaggaatccct
ggaggacctggaagatcaggaagaccaggacctcctgggtatcctggagctaaaggtttc
cctgggtcaggcggacatcctgggcatagtggagatccgggagaaccaggacccctgggt
aatatcggtatccctgggctaccaggatttcccggcgccaaaggtgatccagggcagact
tttggacagcctggtgcacctggacccaaaggattgccaggggaggatggacccagagca
cctacagggagtcctggagatccgggtgacccaggatacagaggaaggccagggcaacct
ggacaaccaggctttcctggggaaccaggaggagaaggactgccaggtttccctgggcct
cgtggcccttcaggtcttccaggttttccagggcctccaggtgatgaaggaggtgtggga
ccattaggcccgccaggcccatttgggcctccaggacctcctggaccaccaggtctggat
ggactgaatgggcttgaaggtccagtggggatgaagggagcacatggtgtagatattcct
ggccctcaaggaccagatggttttccaggagccaaaggtctaagggggccccaaggacct
ccaggaaccacttatgctgtgtctaaaggtccaaggggcccaactggtgatacaggtttt
ccaggctcaccaggctcaccaggttatgctggcaaactatgccaaacgcctttgccaggg
tcctatggagaaataggatatgaaggacctccaggccccccgggtcctcatggagaacct
ggggcaccgggcagcaccagcattttgtccaaaggagacccaggaccagttggccttcct
gggttaccaggacgaaagggaagtaaaggcctccccggaccttctggactttcaaacaac
ccaggaccttccggacccagaggtgagacaggtccaagtggaccaaggggtcctccggga
tccaaaggtccaccaggtgttcctggaccccaaggccgaaagggagacactggcccagcg
ggaaatagaggtgtgaaaggtgcccggggtgattctatcaacggatacccaggaccagcg
ccccgtggacttccgggaccacctggtcatgcaggatctgtgggattcgtaggtgatgtg
ggtccacctggaactccaggacgtaacggagagaagggtcctaaagggactgttggcctc
cctggcagaccaggtcctcctggtcgcaatggtccagttggagacccaggaaatgttggt
gaacaaggatttactggacctgaaggtatcccaggtgtacctggtgatcctggtttgcca
ggccatagcggtgcaattcgatctggcttcatgttggttatccacagtcagtcaattctg
gtgccagtgtgcccctcaggcagcagtcaactctgggtgggctacagtctcatttacctg
gagggtcaagagaaggctcacacacaagatcttggccagcctggctcctgcctccctgtt
ttctccaccatgcctttctcttactgcaacaaagctgcctgtcactactctagtcgcaat
gacaaatcctactggctctccactactgctcccatgtccatgatgccgctctttggtacg
gaaataagagcccacatcagccgctgtgtggtgtgtgagacagctgcacctgcggtggct
tttcacagccaggatcaatcagtccctccatgcccagctggctggaggagtttgtggacg
ggctactctttcctcctgcacacaggggcaggtgatgagggtggcggccagtcactgact
tcctccggtagctgccttaaggatttccgaacgtaccccttcattgagtgccagggtgcg
cggggctcctgccactactttgccaacctgtacagtttttggctgactactgtgagttgg
acagagcagtttaccaccgcaacgcctgacaccattaaagcagccgaccaacagcgacgc
aaagccagccagtgtaatgtctgccttaggcagctataa

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