Amphiprion ocellaris (clown anemonefish): 129350897
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Entry
129350897 CDS
T06018
Symbol
nup188
Name
(RefSeq) nucleoporin NUP188
KO
K14311
nuclear pore complex protein Nup188
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129350897 (nup188)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
129350897 (nup188)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
129350897 (nup188)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
129350897
NCBI-ProteinID:
XP_054874999
Ensembl:
ENSAOCG00000031296
LinkDB
All DBs
Position
17:complement(14068369..14087371)
Genome browser
AA seq
1751 aa
AA seq
DB search
MTEAKMAESEMSVRSCRELWTILLGRSALREPAQIDAELDSHWDRLHQGLSYYKPPSSSS
AGKVKENKDVAQPLKDFGLRISKLLNLDEQQSVQLLQCYLQEDYRGTRDSLKVVLKDERQ
SQALLLKIADYYYEERMCLLRCVLLLLTYFQDERHPYRAEYSNCVNKLEKDLVSKYQSQF
ENLFKAEAPTWETHGNLMTERQVSRWFLQCLREQSLLLEIIFLYYAYFEMSPSDLLSFTK
MFKEQGFGLRQTNRHLVDKSMDALVDRIGYLSSLILVEGMDIDFLHKCALEDCTEQHQFS
SAPDVIKEMDQLLMTFGDIPHHSPVLLAWVLLRHTLRPDESSPVIRRIGNTALQLGVFKY
LSTMLKGLGASGNNCTASTAKMCVYGLLSFVITSFEEESLQSDGVATQCSHLTDAACEVL
SAPSLAEVFWEMKPNMGLGMILDSAVGMFPHKIGPLLQLLTALLSNKSTVKKVYNFLDKM
SFYTQVYKHKPNDIISKDDETLWRRQTPKLLYPLGTGQTNLWMPQGVLGQVMIGGEQGYV
VRWDYSYSSWTLFTCEVEMLLHVVSTADVLAHCARVKPILDLVHKIISTDWTVSDCLLPL
TSRIYMLLQRLTSVINPPVDVIASCVNCLSVLAARMPGKVWSSLHHTGFLPFASNPLTSM
AQCVSAEGMKAGNYGNLLVQIEQPRGEYAVTIAFLRLITTLVKGQLGSTQNKGLIPCVLL
VLKEMLPTYHKWRYNTYGVRERIGCLILELIHAILNLSPEGEDQGSTPTLQSLCIYSLAN
TEAGQAVVNIMGVGVDTIDVVLAAQPSSCGSEGPGQILIQTVKLAFSVTNNVIRLKPPSD
AVSPLEQALTQHGGHGNNLIVVLAKYIYHKHDPALPRLAIQLLKRLATVAPMSVYACLGS
DAAAIRDAFLTRLQSKTEDMRIKVMILEFLTVAVETQPGLIELFLNLEVKDGNEGSKEFL
LGEWSCLHVVLDLIDSKQQGKYWCPPLLHRAALAFLLALWQDRRDSAISVLRTKEKFWEN
LTTPLFGTLTPPSDTTEPCVLETCAFVMKIIGLEIYYVVSGSLEQSLKDGLQKFSNARRY
EYWSQYVKSLVCHVAEMEEEGICYFPETQMLISAWRMLMILSTTHSDVMQLTEDSTKLKL
FMDVLDGTKATLTTPMSVPCLRLGSMMATLLLILLKQWKSVVAAAPDILSPLSLILESVL
QADQQMMERTKAKIFSALISVLQIQGLNGGDISQLPQLLLSVCETVKDEALALIDNTRHM
SQMTDTVEDEDSMETDSPRGLQKDQRDGVCVLALHLAKELCRTDEDGEHWVSVMRKVPVL
PSVLNAVELSLRSKHNLYFTEAALHLLLTLARTPQGAAAVAGAGVIQTICLPLLSVYEVS
SNGATQSFSRKSQDSACWPGVYRLCMSLMESLLKTLHYNFINEALDFVGVHQERILQCLN
AVRTVQSLACLDEADHTVGFLLQLSSFCKEWQFHLPKLLRDVQINLCYLCQTCTYLLHSK
KMLHHYLQAKNGETLPPGPLPRTQRPPQTLNKEAAGGGEREEAEQKALLAVQCSLLKILS
KTLATLQHFTPDCCQILLDQCMDLAEYRTLFVLSFTTPAFDPDVAPSFGTLLATINVALS
MLSEMEKKKEPVSLSIVSLASSEEIQALKSLLMFTMENCFYVLISQAARCLKDPSILPRD
KQRLKQELSSELSTLLSSLSRHFRRGSPSSPASGILPSTQAKPPTPGSKASHEGQEPFIQ
LVQAFVRLVQR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagcgaagatggcggaatcggagatgagcgtcagaagctgtcgagagttatgg
accatactgctgggaaggtctgcattgagagaaccggctcagatagatgcggaacttgac
agtcattgggacagactgcatcagggtctcagttactacaaaccacccagctcatcctct
gctgggaaagtgaaggagaacaaagatgttgcacaaccactgaaggactttggtctgagg
atcagtaaactattgaaccttgatgagcagcagagtgtgcagcttttacagtgctaccta
caagaggactacagaggaactcgtgattcattaaaggttgttctcaaggatgagcgccaa
agccaggctctactgttaaagattgctgactattactatgaggagcgcatgtgtctgctc
agatgtgtcctcctcctgctgacatactttcaggacgagcgtcatccctacagggctgag
tacagtaattgtgtgaataagctggagaaggacctggtgagcaaataccagtcacagttt
gaaaatctcttcaaggcagaagcaccaacatgggaaactcatggaaacctcatgacggag
aggcaggtgtctcgatggttcctacagtgtctgagagaacagtctctgctgctggagatc
atctttctgtattatgcttattttgagatgagcccatctgacctgttgagttttaccaaa
atgttcaaagagcaaggctttggtttgcggcagaccaacagacaccttgtagacaagagc
atggatgcgctggtcgaccgcatcggatacttgagctctcttattctggttgaaggaatg
gacatagatttcctgcacaagtgtgctcttgaggattgcacagaacagcaccagttctca
agtgctcccgatgtcattaaggagatggatcagctgctaatgacattcggtgacatccct
catcatagtccagtgctgctggcctgggtcctgctgagacacactctgagaccagacgag
tccagccccgtgatcaggaggataggcaacaccgccctgcagctgggggtgttcaagtac
ctctcaaccatgctgaaaggtcttggagcctcagggaataattgtacagcaagcacagca
aaaatgtgtgtctacggcctcctctcgtttgtgatcacttcttttgaagaagagagcctg
cagtctgatggagtggcgacgcagtgctcccacctaactgatgctgcctgtgaggtcctc
tctgctcccagtctggctgaagtcttttgggaaatgaagccaaacatgggactaggaatg
atcctggacagtgcagttgggatgttccctcataagattggacctctgctgcagcttcta
actgcacttctgtcaaacaagtcgacggtcaaaaaggtctacaacttcttggataagatg
tccttctacacacaagtttataaacacaagcccaatgacatcatctccaaggatgatgag
acgctgtggaggagacaaactccaaaacttctctaccctcttggcacagggcagactaac
ctgtggatgccacagggagtgctgggtcaggtgatgattggaggcgagcagggctacgtg
gtgcgctgggactactcctacagttcctggactctcttcacctgtgaggtggaaatgctg
ctccatgttgtttcaaccgcagatgtcctcgctcactgtgcgcgtgtgaagcccatcctg
gatctggtccataagatcataagcacagactggactgtgtcagattgtctgttacctcta
acttcacgcatctacatgttgctgcagaggttaacgtcagtcatcaaccctccagtagat
gtgattgcctcctgtgtgaactgcctctctgtactggctgcaaggatgccggggaaggtg
tggtccagtctgcaccacactggtttcctcccctttgcctccaaccctttgaccagcatg
gctcagtgtgtgagtgcggaggggatgaaggcaggtaactatggcaacctgctggtccag
attgagcagcccagaggggaatatgctgtgaccatcgctttccttcgtctcattacaacc
ctggttaagggtcagcttggcagcactcagaacaaaggtctgatcccctgtgtgctgctg
gtgttaaaggagatgctgccaacataccataagtggcgctacaacacctatggagtcaga
gagaggataggttgtcttattttggagctgatccatgctattctcaatctgagcccagag
ggagaagaccaggggagcactcccaccctgcagtctctgtgcatctacagcctggcaaac
acagaagctggacaggcagtcgtcaatatcatgggagttggagtggacaccatagatgtg
gtcttggctgcacagcccagcagctgtgggtctgagggtcccggtcagatcctgatccag
acagtcaaactggccttttctgtcacaaacaacgtcatccgattgaagccaccgtctgat
gccgtgtcccctctggagcaggcgttgacacagcatggtggtcatggcaacaatctcata
gtcgtcctggccaaatatatttaccataaacatgatccagcactccctcgtctcgcaatc
cagctgctcaaaagactcgccacggtggcgccaatgtcagtctacgcttgccttggtagc
gatgcagcagccatccgggatgcgtttctcactcggttacagagcaagacagaagacatg
aggatcaaggtcatgatccttgagtttctcaccgttgctgtggaaacgcagcctggcctc
attgagctctttttgaacctggaagttaaagatggaaatgaggggtcaaaggagtttctt
ctgggagagtggagctgtcttcatgtggtgttggacctgattgactccaaacagcagggg
aaatattggtgtcctccgctgctccaccgagcagccctggccttcctcctcgccctctgg
caggatcgcagggacagcgccatctctgtcttacggaccaaagaaaagttttgggagaat
ttgacaacgcctctttttggaactctcaccccaccttcagacaccacagagccttgcgtt
ttggaaacctgcgctttcgtcatgaaaatcatcggcctggagatctactatgttgtcagc
ggttctttggagcagtctctgaaggacggtcttcaaaagttctccaatgcacgacgctat
gagtactggtcccagtatgtcaagtctctcgtgtgccatgtggcggagatggaggaggaa
ggcatctgttacttcccagagacccagatgttgatctctgcttggcggatgctgatgatt
ctttccactactcattcggatgtgatgcagctaacagaagactcgaccaagctaaagctc
ttcatggacgtcctggatgggactaaagcgactctgaccactcccatgtctgtgccttgt
cttcgccttggatccatgatggccactctgctactcatcctcctcaaacagtggaaaagt
gtggtagcagcagctcctgacatcctgtctccactgtccctgatcctggagagcgtcctg
caagctgaccagcagatgatggagaggaccaaagccaaaatcttctctgcactcatttct
gtgctgcagattcaaggactcaacggtggagatatttcccagctgccccagctgttgcta
tctgtgtgcgagacggtgaaagatgaggccttggcgctcattgacaacactcgccacatg
agccagatgacagacacggtggaggatgaggacagcatggagacagactctcctcggggc
ttacagaaggaccagagagacggggtgtgtgtgctagctctccacttagcgaaggagctg
tgtcgcactgatgaggacggcgaacactgggtctcagtgatgaggaaggttccggtcctc
ccctcggtgctcaacgccgtggagctcagcctgcgctccaaacacaacctctacttcact
gaggctgcactccacctgctgctcacactggcccgcactcctcagggcgcagcagctgtt
gcaggagcaggagtcattcagactatctgccttcctcttctgagtgtatatgaggtctct
tcgaatggggcgacgcagagtttctcccgtaagtcccaggactctgcctgttggccgggt
gtctatcgcctctgcatgtctttaatggagagtctgctcaagacgctgcactacaacttc
atcaatgaagccctggactttgttggagtacatcaagaacgaatactacagtgtctgaat
gcagtgcgaacagtccagagtctggcctgtttggatgaggccgatcacacagtcggtttc
ctgctgcagctctcgagcttctgcaaagagtggcagtttcacctccccaaactgctcaga
gacgtacagataaacctgtgttatctgtgccagacctgcacctatctgctccacagcaag
aagatgctccatcactacctccaggctaaaaacggtgagaccctgccccccggccccctc
cccaggacacagcggccaccccagacgctgaataaagaggcagcaggtggaggggagaga
gaagaggccgagcagaaggccctgctggctgtgcagtgcagtttgcttaagatcctcagt
aaaaccctggcaactctgcagcacttcactccagactgctgccagatactcctggaccag
tgtatggacttggctgagtacaggaccctgttcgtgctcagcttcacaactccagcgttt
gaccccgatgtggctccttcatttgggaccctgctggccaccatcaacgtggccctgagc
atgttgagcgagatggagaagaagaaggagccagtatctttgagcatagtttcactggct
tcatcagaggagatccaggcactgaagtccttgctgatgttcaccatggagaactgtttc
tacgtgctgatctctcaggctgctcggtgtctcaaagatccctccatcctccctcgagac
aaacagaggctcaaacaagagctcagctctgaactgagcactcttctgtcgagcctttcc
cgccacttccggagaggctctccatcatctccggccagcggcatcctcccctccacccag
gccaaaccacccacacccggctccaaggcaagccacgaaggtcaggagccgttcatccag
ctggttcaggccttcgtcagacttgtgcagagatag
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integrated database retrieval system
