Arthrobacter oryzae: Q8Z05_00650
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Entry
Q8Z05_00650 CDS
T09304
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aod
Arthrobacter oryzae
Pathway
aod03420
Nucleotide excision repair
aod03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Q8Z05_00650
03430 Mismatch repair
Q8Z05_00650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aod03400
]
Q8Z05_00650
Enzymes [BR:
aod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Q8Z05_00650
DNA repair and recombination proteins [BR:
aod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Q8Z05_00650
MMR (mismatch excision repair)
Other MMR factors
Q8Z05_00650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Sulf_transp
Motif
Other DBs
NCBI-ProteinID:
WLQ06700
LinkDB
All DBs
Position
complement(144347..147907)
Genome browser
AA seq
1186 aa
AA seq
DB search
MTTPHDVPAPRFSPEELTAMLGERNSPTAEQSAIISSPLTPRLVIAGAGSGKTATMADRV
VWLVANGWVRPEEVLGVTFTRKAAGELASRIGAKLAALQRIAAEDSAHRIFPAGLLSEDA
LEPKVSTYHSYASGIVSDYGLRLGVERDVVLLGGAQAWQLASEVVEAFDGEYEHFRAAKS
TLVKAVIQLAGECAEHLRDPDEVQEWLMHRVAEFEALPYVAGAKKNPTQAAGELGAMLRT
RASVAEMVGRYSEAKRVRGALDFGDLVALAARVASEIPLAAEVERQRFKVVLLDEFQDTS
HAQLVLFSRLFGGGHAVTAVGDPNQSIYGFRGASAGQLFHFVREFPVMVRDSFAVAPTSY
LTTAWRNGRNILSAANVISAPLSAAAAQSGPAGERESADSVEVPPLQPSPAAAQGKVVIG
RFATDEDEARAIAGDVLRYRVTDFEDSAGTERVPPAMAVLCRRRAQMECIRREFEVRAIP
YEIVGLGGLLDTPEIVDLVATLRVLADPGRSDSLMRLLAGARWRIGPADLMAFRDWSSFL
ARRREHPGRDADESDDAGAAVIESDITDSSSLVEALDWLPREGWTSAHGRSLSTEALDRL
HAFSAELRQLRGFMGDDLTTLLGEVERAMLLDIEVAARPGISIHQARRNLDAFHDAAAGF
LHTSQRVDVLAFLAWLEAAATEEGGLDVAAPDVNHEAVQLLTVHASKGLEWDVVFVPGLN
AGAFPSSRDSRWSSGSAALPWPLRGDRGDLPQWDTDQPDQKGWLNAEKDFKAEVQAHGEA
EERRLAYVAYTRAKFVLWVSSAAWVGSRAGMAEMSPFLSELAHLAGIGTEAGGPEPAVER
ADEPAMARGGAEEPAAVVHPASVEESSLPAESPLTQDLELALWPYDPLEGPADPRTGARL
RLVPGRRAAMETAAGRVREAMAGGATGDAALVPAAAEGSRPLRGVAASWAQEADLLLERR
FRRATVQDVHLPGHISASTFVDLGDDPGSVLARLRRPVPREPGMSARKGTAFHAWVEEYF
GKAGMLELDEAPGSDNHIDEAYGLDSMVETFRNSEWAHRAPAHVEVPVETRIGDVVVRGR
IDAVFRDADGGWDLVDWKTGRRPAGGQLKVKAVQLAVYRLAWARLKGVPLDSVRAAFYYV
GEDQVVRPHDLGTAEQLEDIVTAALGGTTALAKAASPVSGTLRPQS
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccgcacgacgtcccggcaccccggttctccccggaggagctgaccgccatg
ctgggcgaacgcaacagccccaccgcggagcaatccgccatcatttcctcgccgctcacg
ccgcggctggtgattgccggtgcaggatcgggcaagaccgccacgatggcggaccgcgtc
gtgtggctcgttgccaacggctgggtgaggcccgaggaagtcctcggtgtaacgttcacg
cgcaaggcagcaggcgagctggccagccgtatcggggccaagctggctgccctgcaacgg
atcgcggcggaagacagcgcccaccggatttttcccgcgggcctgctcagcgaggacgcc
ctggaacccaaggtgtccacctaccattcctacgccagcggcatcgtgtccgactacggt
ctccggctcggcgtcgaacgtgacgttgtgctcctgggcggagcgcaggcatggcagctg
gccagcgaagtcgtcgaggcgttcgacggcgaatacgagcacttccgtgctgccaaatcc
acgcttgtgaaggccgtcatccagctcgcgggcgagtgcgctgaacacctccgtgatccc
gacgaagtgcaggaatggctgatgcaccgcgtcgccgaatttgaagcactgccctatgtg
gccggagccaagaagaatccgacccaggccgcgggagaacttggtgccatgctccgcacg
cgggccagcgttgccgaaatggtgggcaggtactccgaagcgaagcgggtccgcggcgcc
cttgacttcggcgacctcgtagcgctggccgcgcgggtcgccagcgagattccgctcgcc
gccgaagtggagcgccaacggttcaaagtggtgctgctggatgaattccaggacacgtcg
catgcccagctcgtgctgttttccaggctcttcggcggcggccacgcggtgacggccgtg
ggcgatcccaaccaatcgatctacggcttccgcggcgcgtccgccggccagctcttccat
tttgtccgggaattcccggtcatggtccgtgattcgttcgcggtggcacccacttcctac
ctgacaaccgcgtggcgcaacgggcggaacatcctttccgcggccaacgtcatttcggct
ccgctcagtgcagctgccgctcagagcggccccgcgggggaacgggaatctgcggactca
gtggaggtcccgccgctgcagcccagtcccgcggcggcccagggaaaggttgtcatcggg
cgctttgccacggacgaagacgaggcccgggcaatagcgggggacgttttgcgctaccgc
gtcaccgactttgaagacagtgccggaacagagcgggtacctccggccatggcggtcctg
tgccgccggcgcgcacagatggagtgcatccggcgtgagttcgaagttcgcgcaatcccc
tacgagatcgtgggcctcggcggactcctggacacgccggagatcgtggatctggtcgca
accttgcgcgtcctcgcagatccgggccggtcggactcactcatgcggctcctggcggga
gcacgctggcgcataggtccggcagatctgatggccttccgggactggtcgtcattcctc
gcccgccgccgggaacacccgggacgggacgcggatgaaagtgatgacgccggggccgcc
gttatcgagagcgacatcaccgattcgtccagcctggtggaagcgctggactggctgccg
cgggaaggctggacgtcggcccacggcaggtccctcagcactgaagccctcgaccggctg
cacgccttctcggccgaactccgtcagctccggggattcatgggcgatgacctcaccacg
ttgctgggtgaagtggaacgggccatgctcctggatatcgaggtagcggcccgtcctggc
atcagcattcaccaggcccggaggaacctggacgcattccacgatgcggccgcagggttc
ctccatacctcgcagcgcgtcgacgtgctggctttcctggcgtggctggaagccgcagcc
acggaggagggcggcctggacgtcgccgcgccggacgtcaaccatgaagccgtgcagctt
ttgaccgtgcacgcgtccaagggcctggagtgggacgttgtgttcgttcccggcctgaac
gccggcgcgtttcccagcagccgggattcccgctggagcagcggcagtgcagccctgccc
tggccgttgcggggagaccgtggcgacctgccccagtgggacacggaccagccggaccaa
aagggctggctgaatgccgaaaaggatttcaaggcggaggtccaggcgcacggtgaagca
gaagaacgcaggctggcctacgtcgcctatacccgggcgaaattcgtgctgtgggtttcc
agcgccgcctgggtcggttcccgggccggcatggcggagatgtcgccgttcctgtcggaa
ctggcgcaccttgcaggaatcgggacggaggccggcggacctgagccggccgtcgagcgg
gccgatgagcctgcgatggcgaggggaggggcggaggagcctgccgccgtcgtacatccc
gcctcggtggaggagtcatccctgcccgccgaaagtcccttgacccaggacctggaactg
gctctgtggccgtatgatccgctggaaggacccgccgatccgcgcaccggagccaggctc
aggctggtacccgggcgacgcgccgcaatggaaacggctgccggacgggtccgcgaagcc
atggccggcggcgcaaccggggacgcggcgctggttcctgctgccgcggagggctcgcgt
ccgctccggggcgtcgccgccagctgggcgcaggaggcggacctgctgctggagcgccgg
ttccgcagggcaacggtgcaggatgtccacctgcccggccacatctcggcgtcaactttc
gtggacctgggtgacgaccccggatccgtgcttgcacggctgcggcggcctgttcccagg
gagccaggcatgtcggcccgcaagggcacggctttccacgcctgggtggaggaatacttc
ggcaaggcgggcatgctggagctggacgaggcacccggttcggacaaccatatagacgag
gcttacgggctggactccatggtggagacattccggaactcagagtgggcgcaccgtgcc
cccgcccatgtcgaggttcccgttgaaacacgcatcggcgatgttgtggtgcgtggccgg
atcgatgccgtgttccgggatgccgacggcggctgggacctcgtggactggaagacgggc
cgccgtcccgccggcgggcagctgaaggtcaaagctgtccagctggccgtctaccgtctt
gcctgggccagactcaaaggagtcccgctggacagtgtccgggcggccttctactacgtg
ggggaagaccaggtggtccggccccacgacctcggcacggcggagcaactggaagatatc
gtgacagctgccctcggcggaaccaccgcactggccaaggctgccagcccggttagtggg
actttgcgtccacaatcttga
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