Arthrobacter oryzae: Q8Z05_02130
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Entry
Q8Z05_02130 CDS
T09304
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aod
Arthrobacter oryzae
Pathway
aod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q8Z05_02130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aod03019
]
Q8Z05_02130
03009 Ribosome biogenesis [BR:
aod03009
]
Q8Z05_02130
Enzymes [BR:
aod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q8Z05_02130
Messenger RNA biogenesis [BR:
aod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q8Z05_02130
Ribosome biogenesis [BR:
aod03009
]
Prokaryotic type
rRNA helicases
Q8Z05_02130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Ribosomal_L12_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WLQ06976
LinkDB
All DBs
Position
complement(452848..455031)
Genome browser
AA seq
727 aa
AA seq
DB search
MPENHNDATTDAATAETAVETPETAAPEAGSAPLFTEAPAPVEAPAAEAPAAEAPKTEAP
KAEAPKAEDEEEGIRFADLGIDGRVLAALQDVGYEKPSPIQAATIPLLLEGRDVVGLAQT
GTGKTAAFAVPALSRLAELHDLNGPSRKTQALVLAPTRELALQVAEAFTSYAKHIDDFTV
LPVYGGSAYGPQLAGLRRGAQVVVGTPGRVIDHISKGSLDLSELQYLVLDEADEMLRMGF
AEDVEQIFQQTPSDRQVALFSATMPSQIRRMSKQYLNNPAEISVKSKTTTGANTRQRYLQ
VMGPHKLDALTRILEVEEFDGVIAFVRTKMATEDLADKLKARGFQAAAINGDIPQQQRER
TVDALKEGRIDILVATDVAARGLDVERISHVVNYDIPHDTESYVHRIGRTGRAGRSGDAI
LFMTPREKYLLRSIEKATRQPVEQMHLPTAETVNTLRLGKFAERITETLESEDVAAFRDL
ISSYEEEHNVPASEIAAALAVMAQGGQPLLVKELPAAPEFQKRERSKDGFGSRGPTRTLT
EGNATYRIAVGRRQRVMPGSIVGAIANEGGISSAQIGGIDIRSDHSLVELPADLSPEQLR
ALSRTRIGGELIHLELDNGRKPSGGGERGSYQGNRGGDRGGYSGGGDRGGNFKGSGGFKK
DFRKNDGERSSADRGGRSYSERSVGADSGATRGQASDSRFGGHGDGSRKPRHGNEGGQRD
FNRKGKW
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaaaatcacaacgacgccaccaccgacgcagcaactgccgaaaccgccgtcgaa
acccccgagaccgctgctcccgaagccggctccgcccccctcttcaccgaagcgcccgca
cccgtcgaagcgcctgccgccgaagcgcctgccgctgaagcccccaagaccgaggctccc
aaggctgaggcccccaaggccgaggacgaagaagagggcatccgcttcgccgacctcggc
atcgacggccgcgtcctcgccgcgctgcaggatgtcgggtacgagaagccgtccccgatc
caggcagcaaccatcccgctgctgctcgaaggccgcgatgtcgtcggcctggcccagacc
ggcaccggtaagactgcagcattcgcagtaccggcgctgtcccgcctggccgagctccac
gacctcaacggcccgtcccgcaagacgcaggccctggtccttgccccgacccgtgagctg
gcgctccaggttgccgaggccttcacctcctacgccaagcacatcgacgacttcaccgtt
ctcccggtgtacggcggctccgcctacggcccccagctcgccggcctgcgccgcggcgcc
caggttgtcgtcggtacccccggccgtgtcatcgaccacatctccaagggttccctggat
ctgtccgaactccagtacctggtgctggacgaggccgacgaaatgctccgcatgggcttc
gccgaagacgtggagcagatcttccagcagacgccttcagaccgccaggtcgccctgttc
tcggccaccatgccgagccagatccgccggatgtccaagcagtacctgaacaacccggcc
gagatctcggtaaagtccaagaccaccaccggcgccaacacccgccagcggtacctgcag
gtcatgggcccgcacaagctcgacgccctgacccgcatcctcgaggttgaagagttcgac
ggcgtcatcgccttcgtgcgcaccaagatggctaccgaggacctggccgacaagctgaag
gcgcggggcttccaggctgccgccatcaacggcgacatcccccagcagcagcgcgaacgc
actgtcgacgccctcaaggaaggccgcatcgacatcctggtggccaccgacgtcgcggcc
cgcggccttgacgttgagcgcatcagccacgtggtcaactacgacatcccgcacgacacc
gagtcgtacgtccaccgcatcggccgcaccggccgtgcaggccgttccggcgacgccatc
ctgttcatgacgccgcgggagaagtacctgctgcgttccatcgagaaggccacccgccag
ccggtggagcagatgcacctgcccacggccgagaccgtcaacacgctgcgcctgggcaag
ttcgccgagcgcatcacggagaccctcgagtccgaggacgttgccgcgttccgcgacctc
atctcctcctacgaggaagagcacaatgtgcccgcctcggagatcgctgctgcactggcc
gtcatggcgcagggcggacagccgctgctggtcaaggaactgccggcagctcccgagttc
cagaagcgtgagcgctccaaggacggcttcggctcccgtggaccgacccgcacgctgacc
gaaggcaacgccacctaccggatcgccgtcggacgccgccagcgcgtcatgccgggctcc
atcgtgggcgccattgccaacgagggcggcatttcctcggcccagatcggcgggatcgac
atccgctcggaccactccctcgtggagctcccggcggacctgagccccgagcagctgcgc
gccctgtcccgcacccggatcggcggcgagctgatccacctcgagctggacaacggccgc
aagccgtccggcggaggcgagcgtggcagctaccagggcaaccgtggcggcgaccgcggc
ggatactccggcggcggcgaccgtggcggcaacttcaagggcagtggcgggttcaagaag
gacttccgcaagaacgacggcgagcgttcctccgctgaccgcggcggccgctcgtacagc
gagcgttccgttggtgccgacagcggcgccacccgcggccaggccagcgactcccgcttc
ggcggccacggtgacggctcacgcaagccccgccacggcaacgagggcggacagcgtgac
ttcaaccgcaagggcaagtggtaa
DBGET
integrated database retrieval system