KEGG   Arthrobacter oryzae: Q8Z05_11100
Entry
Q8Z05_11100       CDS       T09304                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aod  Arthrobacter oryzae
Brite
KEGG Orthology (KO) [BR:aod00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aod03400]
    Q8Z05_11100
Enzymes [BR:aod01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Q8Z05_11100
    5.6.2.6  RNA 3'-5' helicase
     Q8Z05_11100
DNA repair and recombination proteins [BR:aod03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Q8Z05_11100
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_4th_Lhr WHD_2nd_Lhr WHD_3rd_Lhr DEAD Helicase_C AlkZ-like ResIII MarR_2 DUF6406 AAA_25 AAA_22 PhoH ERF
Other DBs
NCBI-ProteinID: WLQ08691
LinkDB
Position
complement(2400694..2405694)
AA seq 1666 aa
MDRFSQSTREWFLGAFSAPTPAQNGAWNAISSGSHALVVAPTGSGKTLAAFLWALDRLQS
ADPSEPEALPGLDPDTAKGRKPKAPKRKTRVLYISPLKALGVDVERNLRAPLIGITQTAK
RLGLPAPLITVGVRSGDTTTADRRALLSHPPDILITTPESLFLMLTSRARETLAEVDTII
VDEVHAVAGTKRGAHLAVSLERLDALLPKPAQRIGLSATVEPRELVAQFLAGSAPVEIVA
PPSKKNWDLTVSVPVEDMSDLQGAAGAFDSGPASGLQPQASIWPHVEEKIVDLVLANQST
IVFANSRRLAERLTARLNEIYAERQLVAAGGGWGEFGAGAPDFEAVTAGGPAGGTPTSTA
TPAHMMAQAGSTAGADPVLARAHHGSVSKDQRALIEDDLKSGRLRCVVATSSLELGIDMG
AVDLVVQVESPPSVASGLQRVGRAGHQVGEVSQGVLFPKHRADLVHTAITVERMLGGKIE
RLSVPANPLDILAQQTVAATALGSIDVEEWFSTVRRSAPFASLPRSAFEATLDLLAGHYP
SDEFAELRPRIIWDRNAGTIEGRPGAQRLAVTSGGTIPDRGLFGVYIIGTEVEGSASPST
EGKAASPGASAARGGRRVGELDEEMVYESRVGDVFALGATSWKIEDITHDRVLVSPAFGQ
PGKLPFWKGDSLGRPVDLGRALGAFVRELSASDVGPATERCKASGLDDFAANNLIQYLAE
QRLATEVVPSDTTLVVERFHDELGDWRVVLHSPFGMPVHAPWALAVGQRLHQRYGMDGSA
MAADDGIVLRVPMMEDEPPGAELFLFEPEELEQIVTAEVGGSALFASRFRECAARALLLP
RQNPGKRQPLWQQRQRSAQLLDVARKYPTFPIVLETVRECLQDVYDLPALKDIAASIERR
ELRILQTTTQQPSPFAKSLLFGYVAQFLYEGDSPLAERRAAALALDSTLLNELLGRVELR
ELLDAKVIEATERELQRLAPDRRVRGMEGVADLLRLLGPLTPEEVAARLEPAAPVAEPAA
VEPAGTAGAESAAAESAEATVADAAAHLAALQRANRALRVNIGGVERFAAVEDAARLRDA
IGVPLPMGVPLAFIEPVADPLGDLVSRYARTHGPFTATEAAARLGLGVAVVSTALKRLAA
DGRVVEGEFRPHAPPPREAPSPDAAEPGAAEPQAQPAVSVTALAGTSEWCDAEVLRKLRR
RSLAALRAEVEPVDAAAYGRFLPAWQNVRTPGKSRGQSALRGLDGIITAVDQLSGVPVPA
SAWEPLILASRVSDYQPAMLDELMAAGEVLWSGAGALPGNDGWVSLHLADSADLTLNPAP
DYEPGDAQRRLLEHLQNNGGGYFFRQLTDIAGGMDSVLSDQDVVAALWDLAWAGRITGDT
FAPVRAMIAGGHTAHRQVARAPRARAPRMSRLGRAHGTGLLGSAGLTGGRYGSATGAAPT
PPLAAGRWSALPSPELDPTIHARATAELLLDRYGVVTRGSVMAENILGGFGLMYKVLARL
EEAGRCRRGYFIEHLGAAQFAVPATVDRLRSYSEDSQLAKPEPVALALAATDPANPYGAA
LPWPALSVEAGSGHRPGRKAGALVVMVDGALALYVERGGKTLLAFDDAPEVLAAAAAALV
GVVKRGAVDKLIMEKVNGHGILDTPAAAALTHAGAYSTPKGLRIRA
NT seq 5001 nt   +upstreamnt  +downstreamnt
atggaccggttcagccagtccacccgcgagtggttcctcggcgcgttttccgcgcccacc
cccgcccagaacggcgcctggaacgccatttcgtccggctcccacgcgctggtggtcgcc
cccaccggctccggcaaaaccctcgcggccttcctgtgggcgctcgacaggctccagtcc
gccgatccttccgagcctgaggcacttcccggcctggaccctgatacggccaaaggcagg
aaaccgaaggcgcccaagcggaaaacgcgcgtcctgtacatttcgccgctgaaggcgctt
ggcgtcgacgtcgaacgcaacctccgcgcgccgctcatcggcatcacccagacagcaaaa
cggctgggcctgcccgcccctctgatcactgtgggcgtccggtccggggatacgacgacg
gcggaccgccgcgcgctgctcagccacccgccggacatcctcatcaccacgccggaatcc
ctgttcctcatgctcacgtcccgggcgcgggaaacgctggccgaggtggacaccatcatc
gtggatgaggtccatgccgtcgccggaacgaagcgcggcgcgcacctggccgtctcactg
gaacggctggacgcgctcctgcccaaaccagcgcagcggatcggcctgtcagccacggtg
gaaccgcgggaacttgtggcccagttcctggccggttccgccccggtggaaatcgtggcc
ccgccgtcaaagaagaactgggacctgacggtttccgtgccggtcgaggacatgtccgat
ctgcagggggcagcaggcgccttcgactccggccctgcttcggggctgcagccgcaggcg
tccatctggccgcatgtggaggagaaaattgtggacctggtactggccaaccagtccacc
atcgtgttcgcaaattcgcgccgcctcgccgaacgcctgactgcgcgccttaatgaaatc
tatgccgaacgccagctggtggccgcgggaggcggctggggcgagtttggcgccggggcg
ccggacttcgaagcggtgactgccggcggaccggcgggcggcactccgacgtccacggca
acaccggcgcacatgatggcccaggcaggcagcaccgccggtgccgacccggtgctggcg
cgggcgcaccacggttccgtgtcgaaggaccagcgggcactgatcgaggacgacctcaaa
tcgggccggctgcggtgtgttgtggccacgtcctcgctggagcttggcatcgacatgggc
gcggtggacctggtggtccaggttgagtcgccgccctccgtggccagcggcctgcagcgg
gtgggccgcgccgggcaccaggtgggcgaggtgtcccagggcgtcctcttccccaagcac
cgtgcagacctcgtgcacaccgccatcaccgtggaacgcatgctgggcggcaaaatcgaa
cggctcagcgtgcccgccaacccgttggacatcctggcgcagcagaccgtggccgccacc
gcactgggctccatcgacgtcgaggaatggttctccacagtccgccggtccgcgccgttc
gcctccctcccccgctccgcgttcgaggccacgctggacctcctggccggccactacccg
tccgacgaattcgccgaactccgcccgaggatcatctgggaccgcaacgcaggcaccatc
gaaggccgccccggtgcgcagcggctggccgtgacgtccggcggcaccattccggaccgc
ggtctcttcggcgtctacatcatcggcaccgaagtggaaggctcggcgtcgccttccacc
gagggcaaggctgccagcccgggcgcctcggccgccaggggcgggcggcgggtgggcgaa
ctcgacgaggagatggtctacgaatcccgcgtaggggacgtcttcgccctgggtgcgacc
agctggaagatcgaggacatcacgcacgaccgcgtgctggtgtccccggccttcggccag
ccgggcaagctccccttctggaagggtgactcgctgggccggccggtggacctgggccgc
gccctgggcgcgttcgtgcgcgaactttcagcgtccgacgtcggccctgccacggagcgg
tgcaaggccagcggtctcgacgatttcgccgccaacaacctgatccagtacctcgccgaa
cagcggctcgccaccgaagtggtccccagcgataccaccttggtggtggaacggttccat
gacgagctgggtgactggcgggtggtcctgcacagcccgttcggcatgccggtgcacgcg
ccctgggccctggccgtggggcagcgcctgcaccagcgctacgggatggacggttccgcg
atggccgccgacgacggcattgtgctgcgcgtacccatgatggaggacgagccgccgggt
gccgaactgttcctcttcgaaccagaagaactggagcagatcgtgacggcggaggtgggc
ggcagcgccctcttcgcctcgcgcttccgggagtgcgccgcccgggccctcctgctgccc
cggcagaacccgggcaagcggcagcccctgtggcagcagcgccagcggtccgcccagctt
ctggacgtggccaggaagtaccccacttttcccatcgtgctggaaaccgtccgcgaatgc
ctgcaggacgtctacgacctcccggcgctgaaggacattgcagcgtcgattgagcggcgt
gagctgcggatcctgcagaccaccacccagcagccctccccgttcgcgaagtccctgttg
ttcggctacgtcgctcagttcctctacgagggcgattccccgcttgcggagcgccgggcc
gccgcacttgccctggattcaaccctgctcaatgagctgttgggccgcgtggagctccgc
gaactgctggacgccaaggtcatcgaagccaccgagcgcgaactgcagcggctggctccg
gaccgccgggtccgcggcatggagggcgtcgctgacctgctgcgcctcctcggcccgctg
acgcccgaggaagttgccgcgcgcctggaacccgccgccccggtggcggagcccgcggcg
gtggagcccgccggaaccgccggggccgagtcggctgcggccgagtccgcggaagcgacc
gtagcggacgcggctgcccacctcgccgcgttgcagcgggccaaccgcgcactccgggtc
aacatcggcggcgtcgagcggtttgcggcggtggaggacgctgcccgcctgcgggacgcc
atcggggtgccgctgcccatgggggtgccgctggcgttcatcgagcctgtggcagacccc
cttggcgacctcgtctcccgctacgcccgcacccacgggcccttcaccgcaacggaagcc
gctgcccggctgggactcggcgtcgccgtcgttagcacggcgctcaagcggctcgccgcg
gacggccgcgtggtggaaggcgagttccgcccgcacgccccgccgccccgggaggccccc
tcccccgacgccgcggaaccgggcgccgcagagccccaggcacagcctgcggtttcggtc
acggccctcgccggcaccagtgaatggtgcgacgccgaggtcctgcggaagctccgccgc
cggtcactggccgccctccgggcggaagtcgagcccgtggacgcggcggcctacgggcgg
ttcctgcccgcctggcagaacgtccggacacccggaaagagccgtggccagtccgccctg
cgcgggctggacggcatcatcaccgccgtcgaccagctctcgggtgtgcctgttccggcg
tcagcgtgggaacccctcatcctcgccagccgcgtcagcgactaccagcccgccatgctg
gatgagctgatggccgccggcgaggtcctctggtccggtgccggtgccctgccgggcaat
gacggctgggtgagcctgcacctcgcggactcggccgacctcacgctgaaccccgcgccg
gactacgagccgggagacgcccagcggcggcttttggagcacctgcagaacaatggcggc
ggctacttcttccgccagctgaccgacatcgcgggcggcatggactcggtgctgagcgac
caggatgtggtggcggccctttgggacctggcgtgggccggccggatcaccggcgatacg
ttcgctcccgtccgggccatgatcgccggcggccacacagcacaccggcaggtggcccgg
gctccgcgggcacgcgcaccccggatgagccggctgggccgcgcccacggcacgggcctg
ctgggatctgccggactgaccggcgggcgctacgggtcggccaccggggcagcccccact
ccgccgctggcggccggccgctggtccgccctgccgtcgccggaactggatccgaccatc
cacgcccgtgccacagcggaactcctcctggaccggtacggcgtggtcacccgcggctcc
gtcatggccgagaacatcctgggcggattcggcctgatgtacaaggtcctggccaggctg
gaagaggccgggcggtgccgccgcggctacttcatcgaacacctgggcgctgcccagttt
gccgttccggccacggtggaccggctgcggtcctattcggaggattcccagctggccaag
ccggagccggttgccctggcgcttgcggccaccgaccccgccaacccttacggcgcggcg
ctgccgtggccggcgctcagcgtcgaagcaggcagtggccaccggcccggcaggaaggcc
ggggcactggtggtgatggtcgacggcgccctggccctctacgtggaacgcggcgggaag
acgctgctcgccttcgacgacgccccggaggtgctggccgccgcagcagcagccctggtg
ggagtggtcaaacgcggcgctgtggacaagctgatcatggagaaagtcaacggccacggc
atcctggacactccggcagccgccgccctgacccacgccggcgcctattcgactccgaaa
ggactgaggatccgtgcctga

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