Arthrobacter oryzae: Q8Z05_15625
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Entry
Q8Z05_15625 CDS
T09304
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aod
Arthrobacter oryzae
Pathway
aod00470
D-Amino acid metabolism
aod00550
Peptidoglycan biosynthesis
aod01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aod00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Q8Z05_15625 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Q8Z05_15625 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aod01011
]
Q8Z05_15625 (murD)
Enzymes [BR:
aod01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Q8Z05_15625 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
aod01011
]
Precursor biosynthesis
Amino acid ligase
Q8Z05_15625 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Oxidored_nitro
AlaDh_PNT_C
DUF2117
TrkA_N
Pyr_redox_2
FAD_binding_3
NAD_binding_7
Pyr_redox
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
WLQ05538
LinkDB
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Position
3422068..3423669
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AA seq
533 aa
AA seq
DB search
MGGPAVSSPIPSPLATSPRLESLVSWDSDWAGLRVVVTGIGVSGFAAADTLIELGARVVV
VDAATSPIARAQADTLKIVGAVDVLLGEDAVHAMPKIDGQKPDLIVTSPGWRPDQALLAL
AARTHIPVWGDVELAWRVREREGRKTADWLTITGTNGKTTTVGLTESMLQAAGLKAIAVG
NVGTPILDALRDPVEYDVLAVELSSFQLHWSHSVSPVASVCLNVAEDHVDWHGSYASYLA
DKAKVYERTQKACIYNAEQIETERMVENADVVEGCRAVGFTTVTPAISMLGVVEGLLVDR
AFIAERKDSAAELAAMADLGPVAPRHMVANALAAAALVRAYGVEAQAVRQGLKSYIPGEH
RIQLIARHNDVLWINDSKATNPHAAAASLSAFSNVIWIAGGLSKGVSYDELVQEQAPRLK
AVVLIGADTTALTAALKRHAPDVPVIGRTKGDTENVQSADTGDAGTVPSPIYGETVMAQA
VAAAAQLAAPGDTVLMAPAAASMDQFSSYAHRGDAFIEAVRGLVEGQAQTGEE
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtcctgctgtgagcagtcctataccgtcgccgctggcaacgtcgccccgcctc
gagagcctcgtgagctgggactccgattgggccggcctccgggtcgttgtcacgggaatc
ggcgtctccgggttcgccgccgccgacaccctgatcgaactcggcgcccgggttgtggtg
gtcgacgccgccacgagtccgatagcccgtgcccaggcggacaccctgaaaattgttggt
gccgttgacgtcctcctcggcgaagacgcggtgcacgccatgccgaagatcgacggccag
aagccggacctcattgtgacctccccgggctggcgcccggaccaggccctgctcgcgttg
gctgcccggacccacatccccgtctggggcgacgtggaactcgcctggcgggtgcgtgag
cgggagggccgcaagaccgcggactggctcaccatcaccggaacgaacgggaagaccacc
accgttggcctgaccgaatccatgcttcaggcggccggactcaaggccattgccgtcggc
aacgtgggaacacccatcctcgacgccctgcgtgacccggtggagtacgacgtcctcgcc
gtagagctttcgagcttccaactgcactggagccactccgtctcgccggtcgccagtgtc
tgcctcaacgtcgctgaggaccacgtggactggcacggctcctacgcttcctacctggcc
gacaaagccaaggtctacgagcggacccaaaaagcctgcatctacaacgccgagcagatc
gaaaccgaacgcatggtggagaacgcggacgtcgtggaaggctgccgtgccgtgggcttc
accaccgtgacgccggccatcagcatgctcggcgtggtcgagggactccttgtggaccgc
gccttcatcgccgaacgcaaggacagtgccgcagagcttgccgccatggcggacctcggc
ccggtggcaccgcgccacatggtagccaatgccctggcagcggcggcactcgtccgggcc
tacggcgtcgaagcgcaggccgtacggcagggactgaagagctacatcccgggcgagcac
cgcatccagcttattgcccggcacaacgatgtgctctggatcaacgactccaaagcaacg
aacccgcacgccgcggcagcatccctgtcggcgttcagcaacgtcatctggatcgcaggc
ggactctccaagggtgtgagctacgacgaactggtccaggagcaggcaccccggctgaag
gccgtcgtcctgatcggagcggacacaacggcgctcacggccgccctcaagcgacacgca
cccgatgtccccgtgatcggccgcaccaagggcgacactgaaaatgtgcagtccgccgac
acgggtgacgccggcacagtgccctcgccaatctacggggaaactgtgatggcccaagcc
gttgccgcagcggcacagctggccgctccgggggacactgtgctgatggccccggcggct
gcttccatggatcagttctcttcctacgctcaccgtggtgacgccttcattgaagccgtc
cgcgggctcgtggaagggcaggctcagaccggcgaggagtaa
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