Arthrobacter oryzae: Q8Z05_16055
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Entry
Q8Z05_16055 CDS
T09304
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aod
Arthrobacter oryzae
Brite
KEGG Orthology (KO) [BR:
aod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aod03016
]
Q8Z05_16055
Enzymes [BR:
aod01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Q8Z05_16055
Transfer RNA biogenesis [BR:
aod03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q8Z05_16055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
MCD_N
Motif
Other DBs
NCBI-ProteinID:
WLQ05619
LinkDB
All DBs
Position
complement(3525060..3526400)
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AA seq
446 aa
AA seq
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MTPQNPEHTTAGVPAADITPHITVEGFDSLVPEVIDLDAPRDGVPLVIETPAGLERCAAA
IAAGTGPAGVDAERASGFRYGQRAFLVQIRREGSGTWLIDPEPFGDLQIINDALEGVEWI
LHAASQDLPCLSELGMWPHKLFDTELAARLAGLPRVGLAAVIEQLLGFGLAKEHSAADWS
TRPLPEPWLRYAALDVEVLTELREELIELLQADGKLEYAEQEFAAILAAGLAPPRVDPWR
KTSGLHQIRDRRQLAAVRELWLERDSLARKRDVAPGRLIPDSSLVAAAKAMPSTVPQLLG
TKGFHGRAAQREAPRWLRCIATARTMEELPPLHLPTNAPPPPRVWADRDPAAAERLATAR
PLLQDKADELNLPVENLLTPDFLRRVAWRPPAELSEEAIGEELSELGARPWQIELTAPLI
TAAFLNPQPLPPKEPKEPRAAPAAEG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacccctcaaaatccggaacacaccacagccggcgtcccggctgctgacatcactccc
cacatcacggtggaaggcttcgacagcctggtccccgaggtcattgaccttgacgctccc
cgtgacggagtgccgctagtcattgaaacccccgcaggactggaacgctgcgccgccgcc
atagccgcggggacgggccccgccggcgtggacgcggaacgcgcttcgggcttccgctac
gggcaacgggccttcctggtccagatccggcgcgagggctcaggaacatggctcatcgat
ccggaacccttcggggacctgcagatcatcaacgacgccctggaaggtgtcgaatggatc
ctgcacgcggcaagccaggaccttccctgcctctccgagcttggcatgtggccgcacaaa
ctgttcgataccgaactggccgcgcggctggccgggctgccgcgggtggggctggccgcc
gtcatcgagcagctgctcggattcggcctcgcgaaggaacattccgctgccgactggtcc
acccgcccgctgcctgaaccctggctccggtatgcggccctggacgtcgaagtcctcacc
gagctgcgcgaggaactcatcgaactgctccaggccgacggaaagctcgagtacgccgag
caggaattcgctgccatcctggctgccgggctcgccccgccccgcgtggacccgtggcgc
aagacctccggtctgcaccagatccgggaccgccgccagctcgccgccgtccgggagctg
tggctggaacgcgattccctggcccggaagcgggacgtcgcccccggccggctcatcccc
gactcttccctggtggcagccgccaaggccatgccctccaccgttccgcagctgctgggc
accaagggattccacggccgggccgcgcagcgcgaagccccgcgctggctgcggtgcatc
gcgaccgcccggaccatggaggaactcccgccgctgcacctgcccaccaacgcgccgccg
ccgccgcgcgtatgggcggaccgggacccggccgcagccgaacggcttgcgacagccagg
cccctgctccaggacaaagcagacgaactgaaccttccggtcgaaaacctgctcaccccc
gacttcctccgccgcgtggcctggcgtccgcccgcggagctcagcgaagaagcgatcggc
gaagagctcagcgagctcggcgcccggccgtggcagatcgagctgacagcgccactgatt
acagcagcgttcctcaatccgcagccgctgcctcccaaggaaccgaaggaacccagggcc
gctcccgcagcggagggctag
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