Alkaliphilus oremlandii: Clos_0526
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Entry
Clos_0526 CDS
T00607
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aoe
Alkaliphilus oremlandii
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoe03016
]
Clos_0526
Enzymes [BR:
aoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Clos_0526
Transfer RNA biogenesis [BR:
aoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clos_0526
Prokaryotic type
Clos_0526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF2963
Motif
Other DBs
NCBI-ProteinID:
ABW18088
UniProt:
A8MLH4
LinkDB
All DBs
Position
577835..578581
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AA seq
248 aa
AA seq
DB search
MRNIMIEIEYDGSNYSGWQVQPNAITIQEEIMKALKKLEGKDVVIHGSGRTDAGVHAYGQ
VATFLMERNIPVERLPLAMNSNLPKDITIIDAKEVPMDFHARYSAIGKRYIYHIYESRYR
SAILRNYSYHINYKLDRSKMMEASKLLIGTHDFRGFMSNGSSVEDTVRTIKSLEFKSDGE
NIYMIIEGDGFLYNMVRIITGTLVQIGAGNKPLEQIEKILKTKDRSLAGHTAPPQGLFLD
KVFYPLTH
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatataatgattgaaatagaatatgatggaagcaattacagcggatggcaggtt
caacccaatgcaataaccatacaagaagagatcatgaaggctttaaaaaagctagaagga
aaagatgtggtgattcatgggtccggtagaaccgacgcaggcgtccatgcttatggccaa
gtggcgacctttcttatggaaagaaatattcctgtagagcggctccctttagctatgaac
agcaatctaccgaaggatattaccattatagatgccaaagaggtgcctatggatttccat
gcgaggtacagcgccattggaaaaagatatatctaccatatttatgaaagtcgatatcga
agcgctattttaagaaactacagctaccatatcaattataaattagatcgcagcaaaatg
atggaagcaagtaagcttttaataggaacccatgattttagaggatttatgtccaacggc
agcagtgttgaagacacggttagaaccataaaaagtttagaatttaagagcgatggcgag
aatatatatatgattatagaaggcgatggttttttatataatatggtccgaattattacg
ggaaccttggtacaaattggtgcaggaaataagcccttagaacagatagaaaagatcctt
aaaacgaaggaccgaagccttgcaggtcatacagcaccgccacaaggattatttttagat
aaagtattttatcccttgacacactag
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