Alkaliphilus oremlandii: Clos_0549
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Entry
Clos_0549 CDS
T00607
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe03420
Nucleotide excision repair
aoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clos_0549
03430 Mismatch repair
Clos_0549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_0549
Enzymes [BR:
aoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clos_0549
DNA repair and recombination proteins [BR:
aoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clos_0549
MMR (mismatch excision repair)
Other MMR factors
Clos_0549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF3553
AAA_11
ResIII
AAA_12
Tudor_1_RapA
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABW18111
UniProt:
A8MLJ7
LinkDB
All DBs
Position
602569..604788
Genome browser
AA seq
739 aa
AA seq
DB search
MEHHKENINSVHNEKESRYHTLNPMQKNAVLTTEGPVLVLAGAGSGKTRVLTHRIAYLVE
EKGVSPYHILAITFTNKAAKEMKERVEALLGDYHRDLWVSTFHSSCVRILRMEIDKLGYE
KNFVIYDTTDQQVLMKDCLKKFNLDEKLFQPRMILNEIGRAKDLLIGPNEYLEEFGNDFR
NQKIAEIYRLYQDRMKSNNALDFDDLIMKTVQLFQTHPTVLRYYQNKFKYILVDEFQDTN
MAQYTLISLLAKSHGNLCVVGDDDQSIYGWRGADIRNILGFEKDFPNTQVVKLEQNYRST
KSILDAANMVVANNTDRKSKKLWTDNQDGEIIQYYRANNEYDEASFISGTIEKLNEEENR
PYSEFAILYRTNAQSRALEEMLMKRAIPYKIYSGTRFYDRKEIKDILAYLRTIENPVDDV
SVKRIINVPKRGIGIKSIDRFDEYAEGKNESFFGALLHVDQMPDQSTRVKVQTNKFTELI
QSLRDRQDEMSVTDIVKEIYEKTGYIDALMAEDKIEAESRIENLQEFLSVTKDFDENSEV
KTLEEFLARTSLETTLDENDEENTVTLMTLHSAKGLEFPVVFIPGMEESIFPSAMSLQEN
NLEEERRLCYVGITRAREKLYMSHAMTRTLYGRTNANPISRFLGEIPEELIQIDRPYNRK
RDLKEMQTSPLFTGAMMHQKKGNANSINSDAIKAGNKVKHPKFGVGTVVSVAGEMLTIAF
PNSGIKKIASTFIQLEIMD
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggagcatcataaagaaaatataaattctgtacataatgagaaggaatctagataccat
acattaaatccaatgcaaaagaatgcggtactaaccacagagggtcccgtgctggtattg
gcaggagctgggtctggaaaaactcgagtgctaacacatcgtatcgcctacttggtggag
gaaaaaggcgtgtccccctaccatatactggccattacctttaccaataaagcagcaaag
gaaatgaaagaaagggtggaggcgctgcttggggactatcacagagatctatgggttagc
acattccactcctcctgtgtgcgtattttacgaatggaaattgataaattaggatatgaa
aagaatttcgttatttacgatacgacggatcagcaggttttaatgaaggattgcctaaag
aaatttaatctggacgaaaaactattccagcctcgaatgattttaaatgaaattggcaga
gccaaggatttattgattggccccaatgaatatttagaggagttcggcaatgattttaga
aatcaaaaaatagcagagatttatagactatatcaggatcgaatgaaaagcaacaatgct
ctggacttcgatgatttaatcatgaaaaccgttcagctttttcaaacccatccgactgtt
ctgagatattatcaaaataaatttaaatatatattagtggatgagtttcaggatacgaac
atggcccagtacaccttaatcagtttactggcaaaaagtcatggaaacctttgtgttgta
ggggacgatgaccagtccatctatggctggagaggcgcagatatccgaaacattttaggc
tttgagaaggattttcccaatacacaggtggttaagctagagcagaactatcgatcaacg
aagagtattttagacgcagccaatatggtagtggcaaataataccgatcgaaagtcaaaa
aaactatggaccgataatcaggatggggaaatcatacaatactaccgtgccaataacgaa
tatgatgaggcaagctttatttctggtaccatcgaaaagcttaatgaagaggaaaataga
ccgtactcagagtttgccattctatatcgtaccaatgcacagtcccgtgccctagaggaa
atgctgatgaaaagagccatcccttataaaatttatagcggtactcgtttctacgatcga
aaagaaattaaagatattttagcttatttgagaaccatagaaaatccagtagatgatgtc
agtgttaagagaattatcaatgttccgaagagaggcatcggtattaaaagcatcgatcgg
ttcgatgaatatgcagaaggaaagaacgaaagcttctttggtgcccttttgcatgtggat
cagatgccggaccagtccacgagagtaaaggtgcagaccaataaatttacagaattaatt
caatccctaagggatcgacaggatgaaatgtccgttacggatatcgttaaggagatctat
gaaaaaacaggatatatcgatgctttaatggcagaagataaaatagaagcagaaagccga
attgaaaaccttcaagagtttttatccgtaacgaaggatttcgacgaaaactccgaagta
aaaacattggaggaatttttagcgagaacatccttagaaaccaccttggatgaaaatgat
gaagaaaatacggtgaccttaatgacactacacagtgccaagggtctagaattccctgta
gtttttatacctggaatggaggaaagtatcttcccttctgccatgtcacttcaggaaaat
aatctagaagaagagcgaagactttgctacgttgggattactagagcgagagagaagtta
tatatgagtcatgctatgacgagaaccttgtacggtagaaccaatgcgaatcctatttcc
agatttctaggagaaattccagaagaattgattcagatcgacaggccgtataatcggaag
cgggatctgaaagagatgcagacttctcctttatttacaggggccatgatgcatcaaaaa
aagggaaatgcaaatagtatcaatagcgatgcaattaaagctggaaacaaggtgaagcac
ccaaaattcggggtaggtacagtggtttctgtagccggtgaaatgctgaccattgctttc
ccaaattcaggaattaagaaaattgcatccaccttcattcagcttgaaattatggattag
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