Alkaliphilus oremlandii: Clos_1279
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Entry
Clos_1279 CDS
T00607
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Clos_1279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoe03021
]
Clos_1279
Transcription machinery [BR:
aoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clos_1279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF722
Sp-DndD
RFC1
Motif
Other DBs
NCBI-ProteinID:
ABW18824
UniProt:
A8MG96
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All DBs
Position
1382274..1383392
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AA seq
372 aa
AA seq
DB search
MDNTKNSKKETVKNLIEKGKKRGMITYSEVMDALEDVDLDKEQIDEIYDHFSSMGIDIVG
DKRDMVEDLDMMDESVLEPEVEAEEIIEDDASLLKGVNIDDPVRMYLKEIGKVPLLSAEE
EIELAKRMDAGDEEAKKRLVEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFD
YKKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGRDPKP
EEIAAEMDLSEEKVREILKIAQEPVSLETPIGEEEDSHLGDFIPDEDAPAPAEAAAFSLL
KEQLVEVLDTLTPREQKVLRLRFGLDDGRARTLEEVGKKFDVTRERIRQIEAKALRKLRH
PSRSKKLKDYLE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttggacaacacaaaaaattcaaaaaaagaaacggtgaaaaacctgattgaaaaaggtaaa
aaacgaggtatgattacctattctgaagttatggatgctttggaggatgtagatttagat
aaagaacaaattgatgagatctacgatcatttttccagcatgggcattgacattgttgga
gataaaagagatatggttgaggacctagatatgatggatgaatctgtattggagccagaa
gttgaagctgaagaaatcatagaagatgatgcgtctcttttaaaaggtgtaaatatagat
gaccctgtaaggatgtatttaaaggaaatcggtaaggtgcctcttttatcagcagaagaa
gaaatagaattagcgaagcgaatggatgcaggagatgaagaagcgaaaaagagactagtg
gaggcaaacctaagactggtggtaagtattgctaagagatacgtagggagaggcatgcta
tttttagacttaattcaagaaggaaacctagggctaattaaggctgttgaaaaatttgat
tataaaaaaggatttaaatttagtacctatgctacttggtggataagacaggcaattact
agagccatcgcagaccaagcacgtactattcggatacctgttcatatggttgagacaatc
aataagcttatcagagtatcgagacagcttttacaagaattaggcagggatccaaagcca
gaggaaattgcagctgaaatggatctttccgaagaaaaagttcgagaaatactaaagatt
gcccaagagccagtttccttagaaacgcccattggagaagaagaagatagtcatttaggg
gactttattccagatgaagatgcaccagctccagcagaagcggcagctttttcgttgtta
aaggaacaattggtagaagttttagacaccttaacgcctagagagcagaaagtgctaaga
ctacgtttcggactagatgatggtagagcgagaacattagaagaagtagggaaaaaattt
gatgttacgagagagcgaattagacagatcgaagcgaaggcactgagaaagctaagacat
cctagtagaagtaaaaaattaaaagattatttagagtaa
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