Alkaliphilus oremlandii: Clos_1510
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Entry
Clos_1510 CDS
T00607
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe02020
Two-component system
aoe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Clos_1510
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Clos_1510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoe03021
]
Clos_1510
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aoe02035
]
Clos_1510
Transcription machinery [BR:
aoe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Clos_1510
Bacterial motility proteins [BR:
aoe02035
]
Flagellar system
Flagellar assembly proteins
Stator
Clos_1510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
PCI
Sigma70_ECF
GerE
DUF7096
DUF1492
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ABW19053
UniProt:
A8MHG6
LinkDB
All DBs
Position
1613919..1614656
Genome browser
AA seq
245 aa
AA seq
DB search
MEDIKTLWHNYKNNNDSQAKALLIEEYIRLVKFIAGRLYISYGSNIEYDDLVSYGIFGLI
DAIEKFDLNKQVKFETYAQIRIRGAIIDSLRSLDWVPRSIRQKSKKIEEAYSSLENKLGR
SATDVEVSEALDISVKELQEILLNTASFNVISLEEVIFEVGLIGNTAEEQLTEDLICRRE
TYNNLKDTIVQLPERERQVISLYYYNNLTYKEIGKVLDISESRVSQLHSKAISRLKSKLT
SNSPN
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggaagatataaaaactctatggcataattacaaaaataataatgattctcaggcgaag
gcattactgatagaagaatacataagattagtaaaatttattgctgggagattatatata
tcttatggctctaatattgaatatgatgatttggttagttatggtatttttggactaata
gatgcaattgaaaaatttgatttgaataaacaggtgaaatttgaaacctatgcacaaata
cgcataagaggagccattattgatagcttacgaagcttggattgggtacctaggtctatt
cggcaaaagtcaaagaaaattgaagaagcgtatagcagcttagaaaacaaactgggtcgt
tcagctacagatgtagaagtatctgaagcgttggatatttcggtaaaagagctacaggag
atacttctaaatacagcttcatttaatgtaatttccttagaagaggttatttttgaggtg
ggtttaataggaaatacagcagaagaacaattaactgaggatttaatttgtaggcgtgaa
acttacaataatctgaaagatactatagtacaactacctgaaagagaaagacaggttatt
tcattatattactataataatttaacttataaagagattggaaaggttttagatatatct
gagtctagagtatcacagcttcattctaaagcgatttcgagactgaaatctaaattaact
tcgaatagtcctaattaa
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