Alkaliphilus oremlandii: Clos_1660
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Entry
Clos_1660 CDS
T00607
Name
(GenBank) beta-lactamase domain protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Clos_1660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoe03019
]
Clos_1660
Messenger RNA biogenesis [BR:
aoe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Clos_1660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
CFAP54_N
Motif
Other DBs
NCBI-ProteinID:
ABW19200
UniProt:
A8MGH7
LinkDB
All DBs
Position
complement(1759014..1760678)
Genome browser
AA seq
554 aa
AA seq
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MAKKAEKIKIIPLGGLSEIGRNMTAFEYKDDIIIIDCGLSFPEDDMLGIDIVIPDITYLI
KNKDKVKGIVLTHGHEDHIGALPYVLKKLNVPVYGTRLTLGLVEIKIKEHKLSDIQLQKV
DVGQMVQLGEFEVEFIRTSHSMPDSCAIALHTSLGVIFHTGDFKIDYTPIDGQVIDLHRI
AELGKKGVLVMMADSTNVERPGYTMSESNVGATFENIFRNAENRIIVATFASNVHRVQQV
LDAAYNYDRKVVVSGRSMVNVIAVAQDLGVLNVPEGLIIDVNDMDQYDDNRITILTTGSQ
GEPMAALSRMASSEHRKLNIQQGDLVVFSSSPIPGNEKSITRVINQLFEKGAEVIYESFE
DVHVSGHACQEELKLMHRLVKPKYFIPVHGEYKHLKQHAKLAESLGMPKENIFIGQNGTV
FEFGSDYGKINGSVQSGKILVDGLGVGDVGNIVLRDRKHLAEDGLMVVVVTIAKENGKIA
AGLDIISRGFVYVRESEDLIDEARKVVKSVLDGCEQQNIREWSLLKSSIRDSLKDFLYEK
TKRRPMILPVIMEV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaagcagaaaaaattaaaataattcctttagggggattaagcgaaattgga
aggaatatgaccgcttttgaatataaagatgatatcatcatcattgattgtggattaagc
tttccagaagacgatatgctagggatcgacattgtgattccagatatcacatatctgatt
aagaataaagacaaggtaaaggggatcgtgctcactcatggacatgaggatcatataggt
gcattaccctatgttcttaagaaactaaacgtaccggtatatggtacaagactaacgcta
ggattagtagagatcaaaataaaagagcataaattaagtgatattcagctacagaaagta
gatgttggtcaaatggttcagctaggagaatttgaagtagagtttattagaactagccat
agtatgccggactcatgcgctatagcgttacacacttctttaggtgtaatatttcacact
ggagattttaaaatagactatacaccgattgacggacaagtcattgatctgcatcgcatt
gctgaattgggtaaaaaaggcgttttagtgatgatggcagatagtaccaatgtggaaaga
ccggggtatacaatgtctgaaagtaatgtaggtgcaacatttgagaatatttttagaaat
gctgagaatcgtattattgttgctacatttgcatctaacgttcatagggtacaacaggtt
ttagacgctgcctataattatgataggaaagttgttgtatccggacgtagtatggtcaat
gtaattgcagttgctcaggatttaggtgttctgaatgttccagaaggattaattattgat
gtcaatgatatggatcagtatgatgataacagaattactattctaactactggaagccaa
ggagagcctatggcggccttatccagaatggcaagctctgaacacagaaaactaaacatt
cagcagggagatttagttgtattctcatcaagtccaattccaggaaatgaaaagtccatt
actcgtgtaatcaatcaattatttgagaagggtgcagaagtaatttatgaaagctttgag
gatgtccatgtttctggacatgcttgccaagaggaattaaagctaatgcataggttggta
aaaccaaagtactttattcctgttcatggagagtacaaacatttaaaacaacacgcaaag
ctggctgaaagtctaggtatgccaaaggaaaatatatttattggacaaaatggtacagta
tttgaatttggtagtgactatggaaaaataaatggtagcgttcaatcgggcaaaatctta
gtagatggattgggcgtaggtgacgtaggaaatatcgttttaagagatagaaaacattta
gcagaagatggtttaatggtagttgtagttactattgctaaggagaacggtaagattgct
gcagggctagatattatttcgagaggatttgtttacgtaagagagtctgaagacttaatt
gatgaagcgagaaaagttgtgaagagtgttctagatggctgcgaacaacaaaatattaga
gaatggtctttattaaagagttccattagagatagcttaaaagatttcctatatgaaaaa
accaagcgtcgaccaatgattttgccagtgataatggaagtttaa
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