Alkaliphilus oremlandii: Clos_1682
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Entry
Clos_1682 CDS
T00607
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
aoe
Alkaliphilus oremlandii
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoe03016
]
Clos_1682
Enzymes [BR:
aoe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Clos_1682
Transfer RNA biogenesis [BR:
aoe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Clos_1682
Prokaryotic type
Clos_1682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
C12orf66_like
Motif
Other DBs
NCBI-ProteinID:
ABW19222
UniProt:
A8MGJ9
LinkDB
All DBs
Position
1783085..1783822
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AA seq
245 aa
AA seq
DB search
MRNIKLVIEYDGSRYDGWQRLKDSEQTIQGKIEKVLNEMTGSSVEIIGSGRTDAGVHAKN
QIANFKTKSSMSIRDIHNYMNHYLPQDIVVKEVKEVSDRFHSRYNAQKKKYTYYVWNHRI
PSAFQRKYSYYFPETLDLQRMEAAANQLLGTHDFIGFSSVKKAKKSTVRTIEEITIVQNN
HMLEFSFIGDGFLHNMIRILMGTLLEIGTREKDISCIDEIFTSKTRAMAGKTAPAQGLFL
EEVYY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatatcaaattagttattgaatatgatggtagccgatatgatggctggcagcgg
ttgaaagattcagaacagacgattcaaggaaaaatagaaaaggtgctcaatgaaatgacc
ggttcttctgttgaaattataggctctggtagaacagatgcaggtgttcacgctaaaaat
cagatcgctaactttaaaacaaaatctagcatgagtattcgagatatccataattatatg
aaccactaccttcctcaagatattgtcgtcaaagaagtaaaagaggtatccgatcgattt
catagcagatacaatgctcagaagaagaaatatacctattatgtttggaaccatcggatt
ccatctgccttccagcgaaaatacagctactattttccagaaactctggatcttcagcgc
atggaagcagcggcaaatcaactccttggaacccatgactttattggattttcatccgtc
aaaaaagcaaagaaatccacagtgagaaccatcgaagaaatcaccatcgttcagaataac
catatgcttgaattcagctttatcggtgatggatttttacataatatgatccgtatttta
atggggactttactggaaatcggtacgagggaaaaagacatttcttgtattgatgaaata
tttacgagcaaaactagagctatggcaggaaaaactgctcctgctcaaggtttattttta
gaagaagtatattattaa
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