Alkaliphilus oremlandii: Clos_1817
Help
Entry
Clos_1817 CDS
T00607
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe03420
Nucleotide excision repair
aoe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Clos_1817
03430 Mismatch repair
Clos_1817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_1817
Enzymes [BR:
aoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clos_1817
DNA repair and recombination proteins [BR:
aoe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Clos_1817
MMR (mismatch excision repair)
Other MMR factors
Clos_1817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
DEAD
AAA_11
ResIII
FPRL1_inhibitor
Motif
Other DBs
NCBI-ProteinID:
ABW19357
UniProt:
A8MHS5
LinkDB
All DBs
Position
complement(1910368..1912404)
Genome browser
AA seq
678 aa
AA seq
DB search
MIQQYLKQLNPQQLEAVQHFEGPCMVYAGPGSGKTTVITHRVGYLIDHYKVDANKILVIS
FTKAAADEMKSRFEESYQYFSSSDKNVSFGTFHSTFFKILRSYYRYNLGNILDEGEKIGV
IKNIVKTLNIGNELDDDLIKDIILDVGLFKSNILDQDNFTPNSISKEDFERVVFSYETYK
KDSFKIDFDDMLTKCYQLLVNQPSVLQSIRDAYQYILIDEFQDINSIQFEIIKLIVASRK
NLFVVGDDDQSIYSFRGANPNFILEFDRIFKNTKKIILNLNYRSQEIIIDTANKLISNNE
FRVDKKMISTKNPGVEIQFSRPKTREMENQEVSEVISTLLEEGYTYRDIAVIYRTNILSS
SIVDSFLDNNIPFISRDNIYNIYEHWMAKDIVAYLKATVNLNDREALKRIINRPTRYITN
KAKKDADEYHKDFITSLRVKGNLMPYQVTYLDKLEIDLKNLKSMDAKEAIHYIRKDIGYD
DYINNYCLEKGIHGEGLLEILDELEDISLKHGNTMEFLNHINEFKKSLQENKRSSYAKGN
QVELLTMHSAKGLEFKVVIIIEALEEIIPHSKSQDEESIEEERRLFYVAITRAKERLYIY
SPMSKYDKKADVSRFIGEMELFKEKLNTFQKGQEIFHKVFGKGLIQKADKNMLKVWFFKS
NETKDLDLAICAENNLIS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgatacagcagtacttaaaacaattaaatccgcaacaattggaagccgtccagcacttt
gaaggaccttgcatggtatatgcaggacctggctcaggcaaaactacagtaatcacccat
agagtagggtatttaattgatcactataaagtggatgcaaacaaaattttggttatttcc
tttacgaaggctgctgcagatgaaatgaagagcaggtttgaagaaagctatcagtatttt
tcatcttcagataaaaatgttagttttgggacctttcattctaccttttttaaaatttta
agatcttattatagatataatctaggaaacattttagatgagggagagaagatcggtgtg
atcaaaaatattgtcaagacattgaatataggaaatgaattagatgatgatctaatcaaa
gacattatattagatgtggggctatttaaaagcaatatcttagatcaagataactttacg
cccaactctatatcaaaggaagactttgaacgagtagttttttcctatgaaacctacaaa
aaagattcctttaaaattgatttcgatgacatgctgacgaagtgctaccaattgcttgtg
aatcaacccagtgttttacaaagcataagagatgcttatcaatacatattgattgatgaa
tttcaagatatcaatagtatacagtttgagatcattaaactaattgtagcttcaagaaaa
aacttgtttgttgttggagacgatgatcaatccatctatagtttcaggggagcaaatcca
aatttcatcttagaatttgatcgtatttttaagaatacaaaaaaaattatactgaatcta
aactatagatcccaagaaatcatcattgacacagcgaataagctcataagcaataatgaa
tttagggtagataaaaagatgatatctacaaaaaatcctggtgttgagattcaattttct
cgaccgaaaaccagggagatggaaaatcaagaggttagtgaagtaatctccaccttgtta
gaagaaggatatacctatagggatattgctgtcatctacagaaccaatatcctatccagc
tctatcgtagactcctttttagataataatattccatttatatcgagagataatatatat
aatatatacgaacactggatggcgaaggatattgtggcatatttaaaagccactgtcaat
ctcaatgatagagaagcattaaagagaattatcaatcggcccacccgatatattacgaac
aaggcaaagaaagatgcggatgaataccataaagattttattacatccctcagagtgaag
ggaaatttaatgccttatcaagtgacttatctggacaaattagaaatagatttgaaaaac
ttaaaatctatggatgccaaagaggccattcattatattcgaaaagacattggatatgat
gactatatcaacaattactgtttggaaaaaggtatccatggggagggtttattggagata
ttagacgagctagaagacatctctttaaagcacggtaatactatggaattcttaaaccat
atcaatgaattcaagaaatcattgcaggaaaacaaaagaagctcttatgctaaaggaaat
caggtagaattgctgacaatgcatagtgcaaagggactagaatttaaagtagtcatcatt
atagaagctttagaggagattatcccccacagcaagagtcaggacgaggaaagtatagag
gaagaaagacgtttgttctacgtggctattacgagggcaaaggagcgattatatatttat
tcacccatgagcaaatacgataagaaagcagatgtctctcggtttattggagaaatggag
ctgttcaaagaaaaactcaatacatttcaaaaaggtcaggaaatatttcataaggtcttt
ggtaagggattgattcagaaggcagataaaaacatgctgaaggtttggttctttaaaagt
aacgaaacgaaggatttagatttagcaatatgtgcggaaaataatttaattagttaa
DBGET
integrated database retrieval system
