Alkaliphilus oremlandii: Clos_2290
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Entry
Clos_2290 CDS
T00607
Name
(GenBank) Recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
aoe
Alkaliphilus oremlandii
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_2290
Enzymes [BR:
aoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clos_2290
DNA repair and recombination proteins [BR:
aoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Clos_2290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
AAA_11
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABW19823
UniProt:
A8MJ41
LinkDB
All DBs
Position
complement(2447715..2451308)
Genome browser
AA seq
1197 aa
AA seq
DB search
MRQWTKEQQAAIDARGSNLLVAAAAGSGKTAVLVERIIQIILKDRIDIDRLLIVTFTNAA
AGEMRERIAGAIMTEMEKKTGGEEHLRRQLSLLNRASITTVHSFCIDVVRRHFHMIDVDP
GFRIGDVTETSIMKLEALEELFEDEYEKGNEEFFNLVEAFGGTREDRPLQDLVLKIYGFI
QSQPYPEIWLRERVEDFALSIEAFNQSPWIRTIKKRMGILLKGAMDLLEIAQTIALEPGG
PDVYEEAILSDLDQIKELYHSLENPITDFYEQLNCINFIRLKTSKDSDPILKEECKDLRD
KAKDIVKDIRENIFNVSPEEYVEDLNRLYPLMDYLYRLVIGFTERYTEKKTDKGIVDFND
LEHFALRILANDLAAQEYREKFEYIFVDEYQDSNIVQETLIQSIKREDNLFMVGDVKQSI
YRFRLADPTLFIEKYETFGTEEGHINRRIDLAKNFRSRGQVLNGVNYIFKHMMSKELGEI
DYDERAALYQGTEFEPIQDPSIEINLIEKNMEIDEEMEEELQELADIEVEARIVAKRIKA
LLNEEIYDPRVEGYRKIEYKDIVVLLRTTQNWAQSFLEVFVREGIPAYADANTGYFEAIE
VNMFLNLLRVIDNKRQDIPLLSVMRSPIGDFTTEELIHIRVNDKTGTYYDAIEKYVEEKT
DDLKYKLVSFIEKLNQWANDARYIKIDQFIWKLFMDTGYYYYVGAMPGGLQRQANLRVLF
DRANQFEKTSIKGLFNFIKFIEKLQSSKGDMGAAKILGENDNVVRIMSIHKSKGLEFPVV
ITAGMGKNFNLRDTSADVLLHKDLGLGPKFTDPNLRTYRDTIAKLAMKDQIKIESLSEEM
RILYVAFTRPKDKLIVVGSIRNIEKQVKKWSKADNVYSLMNAKNYLDWIGTALVKHPDGQ
ALRELGGLGFDAASDGMEDSEWTINILGRQVIVLEEQDKVLKEEDYREKLLYFNREDFSS
GGYTEYKEEIENRLNWKYDHPHSVQIPSKLSVSDIKKAHINEIDVIAHQIPILVKSPKFM
EGKTTFTAAERGTVIHFVLQHLDLNKVGSEEDIREQIHWMVARELITEEESKVVDTKKIL
NYFYSPIGERMRKAKKVYRESPFIIEKSAGEVIEGLSDDIEDKLLVQGIIDCYFEEKDGL
ILIDYKNDIVLNGNIAAVVARYELQLSLYREALERITGREVKETYLYLFDVDQGVRL
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagacaatggacgaaggaacaacaagctgccatcgatgcaaggggaagtaacctttta
gtagccgctgccgctggctctggtaaaacggctgtacttgtagaaagaattattcaaatt
attttaaaggatcgaatcgatatcgataggcttttaatcgtaacctttactaacgcagct
gcgggagaaatgcgtgaaaggattgcaggagccattatgacagaaatggaaaaaaagact
ggtggggaggagcatttaagaagacagctcagcctattgaatagagcctccattacaacg
gttcactccttctgtatcgatgtagtgagaaggcacttccatatgatcgatgtggatcct
ggctttagaatcggtgatgtgacggaaaccagcattatgaaattggaagccttagaagaa
ctctttgaagatgagtatgaaaaaggtaatgaagaattctttaatctagtagaagctttt
ggcggaacgagagaagatcgaccccttcaagatttggttttaaaaatctacggttttatt
caaagtcagccctatccagaaatatggcttagggaaagagtagaagattttgctctatcc
attgaagcattcaatcaaagtccatggattagaaccataaaaaaaagaatgggtatttta
ttaaagggagccatggatcttttggagatcgctcaaactattgcactggagcccggtggt
cccgatgtttatgaggaagccatactttcagacttagatcaaatcaaggagctttaccat
agcctagaaaatccaattacagatttttacgaacaactcaattgcatcaatttcattcgg
ctaaaaacttctaaggatagtgatcccatcttaaaagaagagtgtaaggacctgcgggac
aaggcaaaggatattgtaaaggatattagggaaaatattttcaatgtcagtccagaggaa
tacgttgaggatttaaatagactatatcccttgatggattatttatatcggttggttata
ggatttacagagcgctatacagagaaaaagaccgataaggggattgtagattttaacgat
ttagagcattttgcccttcggattttagccaatgatttagctgctcaggagtatcgagaa
aaatttgaatacatctttgtggacgagtatcaggatagcaatattgtacaagaaaccctg
atccaatccattaaaagagaggacaatctgtttatggttggcgatgtgaaacagagtatt
taccgtttccgactagcagacccaacacttttcatagagaaatatgaaacctttggaacg
gaggaaggtcatatcaatcgacgaattgatcttgctaaaaacttcagaagtaggggccag
gttttaaatggtgtaaattatattttcaagcatatgatgtccaaggagttaggtgaaatt
gactatgatgaaagagcggccctatatcaaggaacagaatttgagcctatacaagatccc
tccattgagatcaacctcatagaaaaaaacatggaaattgatgaggaaatggaagaagaa
ctgcaggaattagcagatattgaagtagaagcacgaattgtggcgaaaagaattaaggct
ttattgaatgaagagatctatgatcctagagttgaaggctatcggaaaatagaatataaa
gatattgtggtgcttttaagaacaacgcagaattgggcacaaagctttttagaggtattt
gtacgggaaggaattccagcctacgcagatgcgaacaccggctattttgaagccatagaa
gtcaatatgtttctgaatttattaagggtaattgataacaaaaggcaggatatcccttta
ctcagtgtgatgcggtctcctattggagattttacaacagaggaattgattcatattcga
gtaaatgacaaaacgggaacttattacgatgccatagagaaatatgtggaagaaaaaact
gatgatttaaaatataagctggtttcttttatagaaaaactgaaccaatgggccaatgat
gcacgttatattaaaattgaccagtttatttggaagctttttatggatactggttattac
tattatgtaggggctatgcctggagggcttcagcgtcaggcgaacctcagagttttattc
gatcgtgccaatcaatttgagaaaacatccattaagggattatttaattttataaagttt
atcgaaaaattgcagagcagcaagggcgatatgggggcagcaaaaattcttggtgaaaat
gataatgtcgttcggattatgagtattcacaaaagtaagggattggaattccccgtagta
attacagcaggtatggggaaaaactttaaccttcgggataccagcgcagatgtgctactc
cataaggatttgggtttaggaccgaagtttacagacccgaatttaagaacctatagagat
accattgcaaagctggcaatgaaggatcagattaaaatagagagcttatcagaagaaatg
aggattctatacgttgcctttacgaggccaaaggacaagctgattgtggttggctctatt
cgaaatatagagaaacaggtcaaaaaatggagtaaagcggataatgtgtattccttgatg
aatgcaaaaaattatttggattggatcggtactgctcttgtaaaacatccagatggccaa
gctttaagggaactaggaggcttagggtttgatgctgcttccgatggcatggaggactca
gaatggaccatcaatatcttaggtagacaggttatcgtactggaggagcaggataaagtc
ttaaaagaagaagactatcgagagaaattgctctatttcaatagggaggatttttcatct
ggtggctatacagaatataaagaggaaatcgaaaacagattgaattggaagtatgatcat
cctcatagtgtccaaatcccctcaaaactttctgtgtctgatataaaaaaagcacatatc
aatgaaatcgatgtcatcgctcatcagattcctattttagtaaagtcgccaaagtttatg
gaagggaaaacaacctttacagcagcagagcggggaacggtcattcactttgttctacag
catttagatttaaacaaagtgggtagcgaagaggacatcagagaacaaatccattggatg
gtagccagagagttgattacagaagaggaatcaaaggtagttgatacgaagaaaatctta
aattatttttatagcccaatcggagaaaggatgcgaaaggcaaaaaaagtatatcgggaa
tctcctttcattattgaaaaatctgctggtgaagtcattgaaggattatccgatgacata
gaggataagctcctggtacagggaatcatagactgttattttgaggagaaggacggactc
atcttaatagactataaaaatgatatcgtattgaatgggaatattgctgctgttgtggca
aggtatgagttgcagctatctctttatagggaggcactggaacgtattacaggaagagaa
gtaaaggaaacctatttatatttatttgatgtggatcaaggagtgaggctatga
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