Alkaliphilus oremlandii: Clos_2300
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Entry
Clos_2300 CDS
T00607
Name
(GenBank) ATP-dependent nuclease subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aoe
Alkaliphilus oremlandii
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_2300
Enzymes [BR:
aoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Clos_2300
DNA repair and recombination proteins [BR:
aoe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Clos_2300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
CheZ
Motif
Other DBs
NCBI-ProteinID:
ABW19833
UniProt:
A8MJ51
LinkDB
All DBs
Position
complement(2462827..2466261)
Genome browser
AA seq
1144 aa
AA seq
DB search
MAIRYVFGRAGRGKSYFVLEEIKKRLEGEGHHKLFLLVPEQFTLQAERDLIGKQALKGIM
RAEVLSFTRLTHYVFNEVGGITKIPINEIGKNMILRKIADESSKDLSIYKSIAKQEGFIT
KLNDLICEMKQHDITPIELTMEFNEMEEDTLLKRKLNDIILLYQKFNNYLRDRYVDNEDN
VNLLIENIEKVQFLEGAEVWIDGFQSFTPQIFRVIEKLAEKVKNLTITFTMELKSKESDQ
DLFHINRKTYLKIKSIAQRLGLEEEIIDLDRNERPVLPKVQEICHIEKELYAYPYQQYTG
EITHLDVFSGSNLYTEMENVAAQIIHLVRDKGYRWKDIALVSAGLEEYSMILKRVFEEYS
IPYFMDEKRSIMNNPIVELILSSIGILARGYQYEDVFRFLKTGFGDLNKDEVEELENYVL
QYGIKGKDYAVPFTKGFTNKKHEEIEQEESDEIHEEKIKYNEFRERFIAPFLKFEKKIYR
KKKVGHITKALFEFMKDLNIEAKLDQWIEELREKKYFEYVNENTQIWNKVMEILDQLTEI
LAEESTTLKEYGRILEAGFLACEVGVIPTTIDQVLVGSIERSKSHDIKALFVIGVNDGIL
PSSREDGGILLDHERESLDKKGLSIGNTLENALLEEQFTIYSALSKPTEYLWISYALADQ
EGKAQRQSILIDRIKKLFRNLNIQSDVVPTLNRQLHLITTPISTFKYMTESIRQNIDDKP
MEDIWWDVYQWYSNESQWDERRNLMVKGLFHENQISYIGEQKARSLYEHPIKSSVSRLER
FANCPFSHFVTYGLRPKERKEYQLSNPDIGRLFHDSMENFTKELVNEQIQWKDLTREQSD
YFVEKVIDEMVPEFEHGIMLSTHRYQYLVTRLKRISKRAMWTLTEHIKKGQFVPMGHEII
FGLEGDIPPIVIELESGEKIYLEGRIDRVDILNDEDGNYVKIIDYKSGSKEFSLSDVYYG
FQIQLLVYLDAVLSSQSQKYQAEVHPGGIFYFKIDDPMVKTTEKAVKEVEKEINKRLKMK
GLVLKDVNIIKKIDEDIGRSSSILPASLTKEGEISKTSSALPEEDFKALLKHVRGLVKEI
GEEMLKGNVKIEPFKKGGDTSCKYCAYISICQFDHSFHENQYKTIKELKNEEVLEKIRKE
NENI
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcgatacgtatttggtagggcaggtaggggtaaaagctactttgtcttagag
gaaataaagaaaagattagagggagaagggcatcacaagctctttctcttagtaccagaa
cagtttaccttacaggcagagcgggatttaataggaaagcaagcgttaaaggggattatg
agagccgaggtattgagctttaccaggcttacgcattacgtttttaatgaagttggtggg
attactaaaattccaattaatgagatcggtaaaaatatgattttaagaaagattgcagac
gaatcctcaaaggatctttccatatataaatccatagcgaagcaagaaggctttatcaca
aaattaaatgatttgatctgtgagatgaaacagcatgacataacgccaatagagcttaca
atggaattcaatgaaatggaagaggataccctattaaaacgaaaattgaacgatattatt
cttctatatcaaaagtttaataactacttaagggatcgatatgtggataatgaagacaat
gtaaaccttcttattgaaaacatagagaaggtccaatttttagaaggggcagaggtttgg
attgatggattccaaagctttacaccccaaatatttagagtgatagaaaaattggcagag
aaggtaaaaaatcttaccattactttcacgatggagttgaaatctaaggaaagtgatcag
gatttattccatatcaatcgaaaaacctatttaaaaataaaatcaatagcacagcgtctg
gggctagaagaggagatcatcgatttagatagaaatgaaagaccagttctaccaaaggtt
caggaaatctgccatatcgaaaaggaactctacgcctatccatatcagcagtatacaggt
gaaatcacgcatttagatgtgttctcaggatcaaatctttatactgaaatggaaaatgta
gccgcacaaattattcatttagttcgggacaagggatatcgctggaaagatattgctctt
gtctctgcaggattagaagagtacagcatgatattgaagcgcgtatttgaagagtatagc
atcccttatttcatggatgagaagcggtccattatgaataatcccatagtggagcttatt
ttatccagcatcgggattttagcaagaggatatcaatatgaagatgtatttcgatttttg
aaaactggatttggcgatttaaataaggatgaggtagaagaattggagaactatgtactt
cagtatggcattaagggaaaggattatgcagtcccttttacgaaaggatttactaataag
aagcatgaagaaatagagcaagaagaatcggatgaaatccatgaggaaaaaataaaatat
aatgaatttagggagcgattcattgcgccatttttaaaattcgaaaagaagatctatcgt
aaaaaaaaggttggtcatattacaaaagccttgtttgagtttatgaaggatttaaatata
gaagcaaagctggatcaatggatcgaagagctgagagagaaaaaatattttgaatatgtc
aatgaaaacacgcaaatatggaataaggtcatggaaatattggaccagctgacagaaata
cttgcagaagaaagcacgaccttaaaggaatatggcaggattttagaagcaggattttta
gcttgtgaggtcggtgtgatacctaccaccattgatcaagtattagtgggaagtatcgaa
cgatccaagagtcacgatatcaaagccttgtttgtaatcggtgtcaatgacggaatttta
ccatccagcagagaagacggtggcatccttttagaccatgagcgggaatcactggataaa
aaaggactctccataggaaatacgttggaaaatgcactgttagaggagcaatttacgatt
tattctgccttatcgaagcctacagagtacttatggatcagctatgccttagcagatcaa
gagggaaaagcccaaaggcagtcgattctaatcgaccgtataaaaaaactatttagaaac
ttaaatatacagagtgatgtggtgcctactttaaatagacagcttcatctcattacgaca
ccgattagtacatttaaatatatgacggaaagcatcagacagaatatagacgataaaccc
atggaggatatttggtgggatgtatatcaatggtatagcaacgaaagccaatgggacgaa
agacgaaacctaatggtgaagggcttatttcatgaaaatcagatttcctatatcggagag
cagaaggcgagaagcttgtacgaacatccgattaaatccagtgtctccagactagaaaga
tttgcaaactgtcccttctctcatttcgtcacctatggactgagaccgaaagagagaaag
gaatatcagctatccaacccagatatcggcagactattccacgattccatggagaatttt
acgaaggaattagtgaatgagcaaatccagtggaaggatttaaccagagaacaaagcgat
tattttgttgaaaaggtaattgatgaaatggtgccagagttcgagcacggtattatgctc
agtacccatcgatatcaatatctagtgaccaggttaaagcgaattagcaagagagccatg
tggactttaacggagcatataaaaaaaggtcagtttgttcctatgggtcatgagattatt
tttgggttggaaggagatattccacccattgtaattgagcttgaaagtggggagaaaatc
tatttagagggtagaatcgatcgggtcgatatcttaaatgatgaagatggaaattacgtt
aaaataattgattataagtctggaagtaaagaatttagcctatccgatgtttattacggc
tttcagatacagctgctggtatatttagatgccgtactatcgagccaatctcaaaaatat
caggctgaagtccatcccggaggcatcttctattttaaaatagatgatccaatggttaaa
accacggaaaaagctgtaaaggaagtagaaaaagaaatcaataaaaggttaaaaatgaaa
ggattggttttaaaggatgtcaatattattaaaaagatagatgaagatattggaagatct
tctagtattcttcccgctagtcttacaaaagaaggtgaaatttctaaaacttcgtcggcg
cttcctgaggaagattttaaggcacttctaaagcatgtaaggggattggttaaggaaatc
ggggaggaaatgctcaagggtaatgtaaagatagagccctttaaaaaaggcggcgataca
tcttgcaagtattgtgcatatatttccatatgccaatttgatcatagcttccatgagaac
cagtataaaaccattaaagaattaaaaaatgaggaagttttggagaaaataagaaaagaa
aatgagaatatataa
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integrated database retrieval system
