Alkaliphilus oremlandii: Clos_2356
Help
Entry
Clos_2356 CDS
T00607
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
aoe
Alkaliphilus oremlandii
Pathway
aoe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aoe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Clos_2356
09124 Replication and repair
03420 Nucleotide excision repair
Clos_2356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoe03021
]
Clos_2356
03036 Chromosome and associated proteins [BR:
aoe03036
]
Clos_2356
03400 DNA repair and recombination proteins [BR:
aoe03400
]
Clos_2356
Enzymes [BR:
aoe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Clos_2356
Transcription machinery [BR:
aoe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Clos_2356
Chromosome and associated proteins [BR:
aoe03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Clos_2356
DNA repair and recombination proteins [BR:
aoe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Clos_2356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ABW19888
UniProt:
A8MJA6
LinkDB
All DBs
Position
complement(2527451..2529853)
Genome browser
AA seq
800 aa
AA seq
DB search
MERKELISLEEYKEVVISIRSLVEFVLMSGDLDSRFTGSSRALEGTRAHQKVQRSYKEGY
TPEVSLKYCFPYKKYQMTVQGRADGILIEEDRIIIDEIKSTTLPLDLLEENRNLTHWGQA
KCYGYIYAREHQLQNIDIQLTYYHLDTEEIKKFRKTWTFEELERFFNELIEAYYNWVDTL
EHWKRARNISIKELQFPFSNYRKGQRELAVAVYRTIKEEKKLFAQAPTGIGKTISTLFPT
VKAIGEGITSKVFYLTAKTITRQVAEEAFSRMKSMGLRFKTVTLTAKDKICFEKGKQCNP
EECSFAKGHFDRVKSGLADLFQNEDSFTREIIEFYAQRHQICPFEFSLDIAIWADGVICD
YNYVFDPRVYLKRFFADEKGDYTFLIDEAHNLVDRSRGMFSAEINKKIFLEQKRVMKHQS
QKVYKTLDKLNAFMIEARKKCGEHSFYIQKEENTEIYHLLASFVRETDELFKEGYQMDEN
KDLLELYFNAFAFLKIAEFYDERYRTYIEKRQGDVFFKIFCLDPSYLLGEAIKRGRTAIF
FSATLTPLPYFKEILGGAEEDYAIRLGSPFESENLGLMVADYISTKYRNRDRSYIHIADV
IAKVSEGKTGNYFVFFPSYQYMRRVLDVFVEEYPHINVLQQQQTMTEEEREEFLNKFEDQ
PERTSIAFGVLGGIFSEGVDLVGERLIGVIIIGVGLPQLSLEVNLIMEYFNQKNNKGYEY
AYMFPGMNKVLQGAGRVIRTETDRGIVCLVDDRFTSYGYQALFPPEWKHFRKVKDKKQIE
TYLKEFWHNSSDNTDQREEI
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
gtggaacggaaagagttgatttcattggaagaatataaggaagttgtcatatccattcgc
agcctcgtagagtttgtgctgatgtctggggatttagacagccgatttacaggaagcagc
agagcgttagagggtactcgagctcatcaaaaggtacaaaggtcctataaagaaggatat
accccagaggtttcactgaagtattgctttccatataaaaaatatcagatgacagtacaa
ggtagggccgatggcatattaattgaagaagatcggatcatcatcgatgaaataaagtcc
accaccctgcctttggaccttttagaagaaaatcggaatctaacgcactggggacaggca
aaatgctatggatatatttacgctagagagcatcaacttcaaaatatagacattcaactg
acttattaccatctagatacggaagaaataaaaaaattccgaaaaacatggacctttgaa
gagctagaacgctttttcaatgaactgatagaggcctattacaactgggtggacaccttg
gagcattggaaacgagcacgtaatatcagtattaaagaattacaatttcccttttccaat
tatcgtaaagggcagagggaattggcagtggcagtgtatcgaaccattaaggaggaaaag
aagctttttgcccaagcaccgacggggatcggaaagaccatctccactttatttcccaca
gtgaaggcaataggggaagggattacctccaaggtattctatttaacagcaaaaaccata
acgcggcaggttgcagaagaagcttttagcagaatgaaatccatggggctaagatttaaa
accgttactttaactgcgaaggataaaatatgctttgaaaaaggaaaacagtgcaatcca
gaggagtgcagttttgcaaaaggacattttgacagagttaaaagtggattagcggatcta
tttcagaatgaggactcttttaccagggaaattatagaattttatgcccaaaggcaccaa
atctgtccctttgagttttcgttagatattgcaatatgggcagatggcgttatctgtgat
tataactatgtttttgaccctagggtatacttaaaaagattctttgcagatgaaaagggg
gactatacctttttaattgatgaggcccacaacttagtggatcgatccagagggatgttt
tcagcagaaatcaacaagaagatatttttagagcaaaaaagagtgatgaagcatcagagc
caaaaagtatacaagaccttggacaagttaaatgcttttatgattgaggcgagaaagaag
tgtggagagcactctttttatatacagaaggaagagaacacagagatttatcatttattg
gctagtttcgttagagagactgatgaactttttaaagaaggctatcaaatggatgagaac
aaagatctattagagctgtattttaatgcgtttgcttttttaaaaattgcggaattttac
gatgaaagatatagaacctatatagaaaaaagacaaggtgatgtatttttcaagattttc
tgcctagatccatcctatttattgggggaggcaattaaaagaggaagaacagcgattttc
ttttctgcaaccttaacgccgctaccttattttaaggagattttaggtggcgcagaagag
gattatgccatccgattaggctcgccctttgaatccgaaaacctaggattgatggtagcg
gactatatctctacgaaatataggaaccgagatcgcagttatatacatatagcagatgtg
attgccaaggtatccgaaggtaaaacgggaaattattttgtttttttcccctcctatcaa
tatatgagaagggtattggatgtatttgtagaagaatatcctcatatcaatgtattacag
cagcaacagaccatgacagaagaagagcgggaagaatttttaaataaatttgaagatcaa
ccggagcgtacatctattgcttttggtgttttagggggcatattttccgaaggagtcgat
ttagtaggagaacgattaattggtgtaattattattggtgtaggacttccacagctttct
ttggaggtaaacctgatcatggaatactttaatcagaaaaataataagggctacgaatat
gcttacatgtttcctggcatgaataaggtattacaaggtgcagggcgagttatacggacg
gaaacggaccgaggcattgtttgtcttgtagatgacagatttacttcctatggctatcaa
gctttatttccaccagagtggaagcattttaggaaagtgaaggataaaaagcaaatcgaa
acctacctaaaagagttttggcataattcaagtgataatacagatcaaagggaagaaatt
tga
DBGET
integrated database retrieval system
