KEGG   Alkaliphilus oremlandii: Clos_2526
Entry
Clos_2526         CDS       T00607                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
aoe  Alkaliphilus oremlandii
Pathway
aoe03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aoe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Clos_2526
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aoe03400]
    Clos_2526
Enzymes [BR:aoe01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Clos_2526
DNA repair and recombination proteins [BR:aoe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Clos_2526
SSDB
Motif
Pfam: AAA_19 HHH_RecD2 AAA_30 SH3_13 OB_YrrC UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 PIF1 HHH Helicase_RecD HHH_2 nSTAND3 PhoH AAA_22 UvrD-helicase AAA_28 AAA T2SSE RsgA_GTPase SLFN-g3_helicase AAA_24 DEAD UvrD_C Herpes_Helicase ATPase_2 SRP54 AAA_16 NPHP3_N AAA_5 AAA_29 TrwB_AAD_bind AAA_14 ABC_tran Rad17 AAA_18 ABC_ATPase PRK cobW CbiA FtsK_SpoIIIE MMR_HSR1 NTPase_1
Other DBs
NCBI-ProteinID: ABW20057
UniProt: A8MJS5
LinkDB
Position
complement(2731601..2733847)
AA seq 748 aa
MKSLGGSIVVEIEGRLVEIIFQNEGNGYLVGILDCEEEEVTIVGCLPALKEGEVIAAKGN
WIVHPVYGRQLDVKEYRHVQPSTREGILNYLSSGVIKGIGKKMAERIIDHFGTDALEIIQ
YAPQRLTEVSGIGESKAETIAEAFEEQRELREIILFFSQYGITPSYAVRIYKKYKEMTIA
YIQENPYRLADEISGIGFKKADQIARAMGISLNSKYRIHSGIKYMLGTFHGEGHTYAPGD
ILIDRTRELLSVEESEVVEGIQELALKQKIQLERQDEEIIVYSMPYFYAETNTCNKLIEL
SQVELEPLEIDVDYEIESIEKEDGIALATNQKEAIRQSIENGIIVITGGPGTGKTTIINT
LIKVFGKLKKKILLAAPTGRASKRMTEATGKEAKTIHRLLEMGYSDDDDGMLFQRNEENP
LPADIIIIDEVSMVDIMLMNSLLKAISVGTRLIFVGDVDQLPSVGAGNVLRDIIDSKIIK
VVRLNEIFRQAEESMIVVNAHKINKGEYPILNHKDKDFYFMSRSRSEDILNTIIGLVKER
LPKHYKFDPIKDIQVLTPMKKGEVGSINLNKELQNYLNPPDKYKREKELREKVFRVGDKV
MQIKNNYTLKWASLDPDTEERQGEGVFNGDMGYIQHINPEAQELTVFFDDNRSVVYTYTQ
LDELELAYAITIHKSQGSEFPVVVMPVTWGPPMLLTRNLLYTAITRARSLVVLVGTENYL
NLMVSNNKIVERYSGLGIRLKKFYNFMT
NT seq 2247 nt   +upstreamnt  +downstreamnt
gtgaagtcgttgggaggaagcatcgtggtagaaatagaaggcagattggtagaaatcata
tttcagaacgaaggaaatggatatttagtaggcatattggattgtgaagaggaagaagtg
accattgtaggctgcttaccggctctaaaggaaggggaggtcattgcagcaaagggaaac
tggattgtccatcctgtctacggtagacagctggatgttaaagaatatcgtcatgtccag
ccttcaaccagagaagggatcttaaactatttatcctccggcgttattaaagggatcgga
aagaaaatggcggagcggatcatcgaccatttcggcacagatgctctagaaattatccag
tatgctcctcaaagactgacggaggtatcagggattggtgagtctaaggcagaaaccata
gcagaggcatttgaagaacaaagagagctccgagagattatcctttttttctcccaatac
ggaattaccccaagctatgcagttcgaatctataaaaaatacaaagagatgaccatagcc
tatatacaggaaaatccctaccgcttagccgatgaaatcagcggcattggctttaaaaaa
gcggatcaaattgcacgagctatgggaatctctctaaattcaaaatatcgaatccattct
ggaattaaatatatgctggggaccttccatggggaagggcacacttatgcgcctggcgac
atactcatagatcgaaccagggagcttttatctgtagaagaaagtgaagtggtggaaggt
atacaggagctggcattgaagcaaaaaatacagctagaaaggcaggatgaagaaatcatc
gtgtattccatgccatatttctatgcagaaaccaatacctgcaataagctgatagagctt
tctcaagtagaattagagccactggagatcgacgtggattatgaaatagaaagtatagaa
aaagaagacgggattgcccttgccacaaatcaaaaagaggccattcggcagtctatagaa
aacggtattattgtaatcacaggaggaccaggaactggtaaaacgacaattatcaatacc
ctaatcaaggtctttggaaagctgaaaaagaaaatattattggcagcaccaacaggaaga
gcttccaagcgtatgacggaggccactggaaaggaagcaaagactatccatcgattattg
gaaatgggctacagtgatgatgatgacggtatgctatttcaaagaaatgaagaaaatcca
ctaccagcagatatcatcatcatcgatgaggtgtccatggtggatattatgctgatgaac
agccttttaaaagctatatccgttggtacgagattgatatttgttggcgacgtggatcag
ctaccgtccgtcggtgcaggcaatgtactgcgggatattatcgatagtaaaattatcaag
gttgtacgcctcaatgaaatttttcggcaggcagaagaaagtatgattgtagtcaatgcc
cataaaataaacaaaggggagtatcccatattgaaccataaggacaaggacttctatttt
atgtccagaagtcggtcggaggatatcctcaatacgatcataggattggtgaaggaaaga
ctaccgaagcattataaattcgatccaatcaaagatattcaggtgttaacccccatgaaa
aaaggcgaggtaggcagtatcaatcttaacaaagagctacaaaattatttaaatccaccc
gataaatataagagagagaaagaactgcgcgagaaagtcttccgtgtgggggataaagta
atgcagattaaaaataactatacattaaaatgggcaagtctagatccggacacagaggag
cgacagggcgaaggtgtattcaatggagatatgggatatatacagcatattaacccagaa
gcccaagaactgacagttttcttcgatgataaccgcagtgtggtgtatacctatacccaa
ttagatgagctggagcttgcatacgccattaccatacacaaaagccagggaagtgaattc
ccagtggtggtgatgcctgtcacatggggaccgccaatgctcttaactcggaacctttta
tatacagcaataaccagagcaaggtccttagtcgttctcgtagggacagaaaactattta
aacctcatggtgagtaacaataagatcgtggagcgatattctggtcttggaataagatta
aaaaagttttataactttatgacctaa

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