Asparagus officinalis (garden asparagus): 109819415
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Entry
109819415 CDS
T05243
Name
(RefSeq) serine/arginine-rich splicing factor RS2Z32-like
KO
K12896
serine/arginine-rich splicing factor 7
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109819415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109819415
Spliceosome [BR:
aof03041
]
Common components
Common spliceosomal components
SR proteins
109819415
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
zf-CCHC_5
RRM_5
zf-CCHC_3
RRM_occluded
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
109819415
NCBI-ProteinID:
XP_020240724
LinkDB
All DBs
Position
8:complement(128351592..128356040)
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AA seq
341 aa
AA seq
DB search
MPLAGSTIYLLIDFPTRAKSRRERLGFLRFLSSFSSKMPRYDDRYGGTRLYVGHLSSRTR
TRDLEDLFSRYGRVRDVALKHDYAFVEYSDPRDADDARYSLNGRDFDGSRIIVEFAKGGP
RGSGERGGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIERNC
HNSPKSLRRGRSYSRSLSPRPRRGRSRSRSFSRSRSYSRSRSPAPRRRERSLDRDDRRSR
SPRYSPKSKNSRSPPPKSRNRSISPEGSGSPPPREQKKAEQNGSEYSGSPKRNDSRSPIS
QEREGSPEANGRSPSPRDYGDADDNNNNNNHGSKGSESPQE
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgcccctcgctggcagcactatatatctcctaatagactttcccactcgagcaaaatct
cgacgggagcggctagggtttctgcgatttctctcttcgttcagttcaaagatgcctcga
tatgacgatcgctacggcggcacaaggttgtatgttggtcatttgtcttcccgcactcgt
acacgtgatcttgaagacctttttagcagatatggcagagtacgtgatgtggctttgaag
catgactacgcctttgttgaatacagtgatcctagagatgcagatgatgcaaggtacagc
ttaaacggaagggattttgatggaagtcgaatcattgtggaattcgctaaagggggtcca
cgaggctcaggagagagaggaggcggatcccgtgaatatcttggaagagggcccccacct
ggctctggtcggtgcttcaactgtgggattgatgggcactgggcaagagattgcaaagca
ggggattggaaaaacaagtgctatcgctgtggagaaagaggtcacatagaaagaaactgc
cacaacagtcccaagagtctgagacgtggccgaagttattctcgatcgctatctcctcgc
cctcgtcgtggtagaagccggagccgaagtttcagccgtagtcgtagctacagtcgatct
agatctcctgctccaaggagaagggagcgaagcctagaccgagacgacaggcgatctaga
agccctagatacagccccaaatcaaagaacagtcgcagtcctccaccaaagtcaagaaac
cgcagcatttctcccgaaggtagcggaagcccaccaccaagggagcagaaaaaagctgaa
caaaacggctcagagtacagcggaagcccaaagagaaacgacagccggagccctatcagc
caagaaagagagggttctccagaggcaaatggccggagcccgagccctagggattatggg
gatgccgatgacaacaacaacaataataatcacgggtcgaaaggcagtgaatccccgcag
gaataa
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