Asparagus officinalis (garden asparagus): 109819593
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Entry
109819593 CDS
T05243
Name
(RefSeq) zinc finger CCCH domain-containing protein 59
KO
K24939
CWF19-like protein 1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109819593
Spliceosome [BR:
aof03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109819593
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Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
zf-CCCH_DUS3L
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_10
zf-CCCH_9
zf-CCCH_3
CRAM_rpt
Motif
Other DBs
NCBI-GeneID:
109819593
NCBI-ProteinID:
XP_020240953
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All DBs
Position
8:8344393..8357597
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AA seq
600 aa
AA seq
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MSPPPRILLCGDPLGHLNQLFKRVQSVNKSSGPFDALLCVGQFFPESDEGIDEVADYVEG
RCSVPIPTYFTGDYGAGAARFLSKASNLGFKTDGIEVCANLYWLKGSGKFSLHGLSMVYL
SGRKYPDAGGRGRYSEDDVDALRALIDESGIVDIFMTNEWPSGVSEGADTTDALPAVSDP
WGSDPVVAELAAELKPRYHVAGSKGIFYARQPYSNTDSVHVTRFLGLAAVGNKDKQKFIH
AISPIPASTMSAAELQSKPLHTTSSPYMIAAKPERTGEATKRPANSDIDVQYWRYDVSRK
RQRQGGPERLCFTFTSTGSCSLGEKCNFRHDTDAREQYLRNVCFDFLNKGKCERGPDCRF
THNVVDEGVIPQRTRTNGGRKSSGKNCWFCLSSPDVESHLILSLGETYYCALAKGPLVQD
HVLLIPIEHHPDTLTMPSEAEKELGIYKNALSTYFKNQGKAVVFFEWIFQGIPHANLQGV
PIPLSKASRTLFAFNFAAKQLEFEFTVLSKSSDNTEGRNLLRSQFDGKSNLFYAELPDGT
ILSYATDDKNKLHVQFGREVLAGLLKLTDRDNWKKCVSKEDETKMAENFKKGFQEFDPAR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccccctccaagaatcctcctttgcggcgaccccctcggccacctcaaccaactt
ttcaaacgagtccaatcggtgaacaaatcgagcgggccgttcgatgcccttctctgcgtc
ggccagttttttcctgagtccgatgaagggatcgacgaggtcgctgattatgtcgaaggc
cgatgctccgttccaattcctacttatttcaccggcgattacggcgctggagctgctcga
tttctatcgaaagcttctaatcttgggtttaagactgatgggattgaggtttgtgctaat
ctctactggttgaagggcagcggcaagttctctcttcatgggttgtcgatggtttattta
tctggacggaagtacccagatgctggtgggaggggtaggtacagtgaggacgatgttgat
gctttgcgagctctgattgatgagtcaggaatagttgatattttcatgactaatgaatgg
ccaagtggggtttcagaaggagctgatacaactgatgctctaccagcagtctccgaccct
tggggcagtgaccctgtggtcgcagagttggctgcagaactcaaacctaggtatcacgtt
gcaggttccaaaggaatattttatgcacgtcagccttactctaacactgactctgtacat
gtcacccgatttcttgggttggctgctgttgggaacaaagataaacagaaatttattcat
gccatttctcctattcctgcgtcgaccatgtcagctgcagagttacaatcaaaaccattg
cacacaacttcgtcaccatatatgattgcagcaaagccagagcgtacaggagaagcaacc
aagcgacctgctaatagtgatatcgatgtacaatattggcgctatgatgtttcccgaaag
cggcaaaggcagggagggcccgaacgattgtgctttacatttacatctacaggatcttgt
tctctaggagaaaagtgcaactttcgacatgatacagatgcaagggagcaatatttgcga
aatgtttgttttgactttcttaacaaaggaaaatgtgaacggggtccagattgcagattt
actcacaatgttgtcgatgaaggagttatacctcagaggaccagaactaatggtggcagg
aagagctcagggaaaaattgttggttctgcttgtcaagccctgatgtagagtcacatctc
atactgagccttggagaaacctactactgtgcactagctaagggtccactcgttcaggac
catgtcctgctgataccaattgagcaccaccctgatactcttactatgccttcagaagct
gagaaagaacttgggatatacaaaaatgctttgagtacatacttcaagaaccagggaaag
gctgttgttttctttgagtggatctttcaaggtatccctcatgcaaatcttcagggtgtt
cccattccattgtctaaagcatctagaacactctttgcttttaattttgctgccaagcag
ttggaatttgagtttacagtgctgtcaaagagcagtgacaacactgaaggaagaaattta
ctgaggtctcagtttgatgggaaatcaaatttattttatgctgaactccctgatggtacc
atattgtcatatgctactgatgacaaaaataagttacacgtccagtttggacgagaggtg
ctagcagggcttcttaaattgactgacagagataattggaaaaaatgtgtaagcaaggaa
gatgaaacaaagatggcagaaaatttcaagaaaggttttcaagaatttgatccggccagg
tga
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