KEGG   Asparagus officinalis (garden asparagus): 109819680
Entry
109819680         CDS       T05243                                 
Name
(RefSeq) protein NEDD1
  KO
K16547  protein NEDD1
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aof03036]
    109819680
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:aof04812]
    109819680
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Centrosome formation proteins
   Pericentriolar materials (PCM)
    Other PCM proteins
     109819680
   Microtubules and associated factors
    gamma-tubulin ring complex
     109819680
Cytoskeleton proteins [BR:aof04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Gamma-tubulin complex components
     109819680
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40 Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4 PAN2_N bZIP_2
Other DBs
NCBI-GeneID: 109819680
NCBI-ProteinID: XP_020241086
LinkDB
Position
8:130701747..130708147
AA seq 789 aa
MSFVDRSASLLATCGGDTVKLFDVSVDSGDPCALSYSPTPGSQVNCVKWNHTNLVVASAG
DDKKISLWRKNGESMGSVPFSGNENGDDLEESVVTISFSNKSSRYLCSGGSGRIVRIWDL
QRKRCIKWLTGHTDAITGVMYNCKDEHLASISMKGDLILHNLASGARAAELKDPLGQVLR
VLDYSRLSRHILVTAGDGGSVHLWDTTGRVPKVSWLKQHSAPISGVCFSPSSDKIIASVG
LDKKLYTFDSGSRKPTSCIPYEAPFSSLAYSDDSNILAAGTNSGRVVFYDVRGKPQPFTV
LRAYVSSEAVTSLCWQRSKPVIVSENNCTAEAALLGGINEDSVLMPDPLPSIAVSNFTSA
AALSSSHSSINRSTSGSVSSASYSPMLPEETPAKSRLWKGGSLSRLHAPHSGYDTKDDMD
VFSPLVDVQPITPSLSNWWDENDAKKDNALLDKKSSILAASSRRFPFTEGNSDSHPTSDW
LSDTTSKQDDDLASETSATPVAPLKSDSSLSPTPPEAWGGNALPDKLTHRQQPTSMFSRG
SVSLPFDSTFAGLHDTSSAISRSTINSLTSTRSKSTNLQSRVTFASESSTFSESSSVYSS
SSFSTSLGSKVMASSANTELPGLIQSTLPRRYSTYAERISTTSTFGDGIGSAMGSPKSKK
SGLETREALLNNLQLRQDSSTSMGFGSLPAINGQASQLPQTLGQPVDQQQGFSSFSLQLV
QRTLEETLGSVQKSIHEDVRNLHIELLRQFHLQETEMTSLLNSVLEKQDELMKEVQNLRR
ENQQLRQLL
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgagcttcgtcgatcggtcggcgtcgctgctggccacgtgcggcggcgacaccgtcaag
ctcttcgacgtctccgtcgactccggcgatccctgcgccctcagctactcgccgacccct
ggatctcaagttaactgcgtcaaatggaaccacactaatcttgtagttgcaagtgctgga
gatgataagaagatttcgttgtggcgtaaaaatggtgaaagtatggggtctgttcctttc
tcagggaatgagaatggtgatgatttggaggagtctgtagtaactatcagttttagcaac
aaaagttctaggtacctttgttctgggggaagtggtcggattgttagaatatgggatttg
caaaggaagcgttgcatcaaatggttgactggtcatactgacgcaataactggtgttatg
tacaactgcaaagatgaacatttggcatcaatcagtatgaagggggatcttattctccac
aaccttgcttctggagcaagggctgctgaactcaaggatccacttggccaggtattaagg
gtgctcgattattctcgacttagtaggcacattttggttacagcaggtgatggtggatct
gtacatctatgggatacaactggtcgagttccaaaggtatcatggctgaaacaacattct
gcacctatatctggtgtttgcttctcaccatcaagtgacaagatcattgccagtgttggt
ctggataaaaagttatatacatttgattccgggtcaagaaagcctacatcatgtattcct
tatgaggcacccttctcttcactagcatatagcgacgacagcaacatactagcggctgga
acaaacagcggacgtgtagtattttatgatgttcggggaaaacctcaaccttttactgtt
cttcgtgcatatgttagttctgaggctgttacgagtttgtgctggcagaggtcgaagcct
gtcattgtcagtgagaataattgcactgctgaagctgctcttcttggtggtataaatgaa
gattctgttcttatgccagacccactgccttccatagcagtgtcaaactttacttcagca
gctgcattgtcgagctctcattcttcaatcaacagatccaccagtggatctgtatcaagt
gcctcgtattcaccaatgttaccagaggaaactccagcaaagagtcgcttatggaaaggt
ggatctttgtcaaggctacatgcacctcattctggctatgacacgaaggacgatatggat
gtattttctccacttgtagacgttcagccaattactccgtctctaagcaactggtgggat
gaaaatgatgcaaaaaaggataatgctctccttgataagaagtcttcaatccttgctgcc
tcctcaaggagattcccatttactgaaggcaacagtgactctcatccgacctctgattgg
ttgtctgatacaacttccaaacaggatgatgatcttgcatcagaaacaagtgcaacacct
gttgcacctttgaagagcgactcatcattgtctccaactcctcctgaagcttggggtgga
aatgcattgcctgacaaattaacccatcgccaacagccaacctctatgttttcacgtggt
tctgtatcattacccttcgactctacatttgctggcctacatgatacatcttcagccatt
agtcgctcgactataaactctttgacaagtactagatcaaaatctacaaacttgcagagc
agagttacctttgcaagtgagagctctactttttcagagtcttcatctgtttacagttca
agttctttttccacgtcattagggagcaaagtaatggcatcatcagccaatacagagttg
ccaggattaatacaatcaacacttccccggagatattcaacttatgctgaaagaataagt
acaacctcgacgtttggcgacggaataggttcggcaatgggttcaccaaaatcaaagaaa
tctggtctggaaactagggaagcacttttaaacaacctacaattaaggcaagattcatca
acttccatgggatttgggagccttccagcaatcaatggacaggcgtctcaattgccacag
acccttggtcagcctgtagatcaacaacagggtttttcttcattttcacttcagctagta
caacgaactcttgaagaaactttgggttctgtacaaaagtctattcatgaggatgtgagg
aaccttcacatcgagctgctaaggcaattccatctgcaggagacggaaatgacaagcctg
ctgaattcagtcctagaaaagcaagacgagctgatgaaggaagttcaaaatctgagaagg
gaaaaccagcagctccgtcagttactctag

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