KEGG   Asparagus officinalis (garden asparagus): 109819838
Entry
109819838         CDS       T05243                                 
Name
(RefSeq) transcription elongation factor SPT6 homolog
  KO
K11292  transcription elongation factor SPT6
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aof03021]
    109819838
   03036 Chromosome and associated proteins [BR:aof03036]
    109819838
Transcription machinery [BR:aof03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     109819838
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     109819838
SSDB
Motif
Pfam: SH2_2 HHH_7 YqgF SPT6_acidic Spt6_S1 HTH_44 HHH_9 SH2 S1 S1_RRP5
Other DBs
NCBI-GeneID: 109819838
NCBI-ProteinID: XP_020241360
LinkDB
Position
8:complement(114284697..114294572)
AA seq 1602 aa
MGGRTVVSDDEDEIEEEEDGREEKEAVEVDERDDEDDDEEDEEGQDEYEKDDFIVDDEEE
VEEDEEDGKKDDSDGERHRKKKKKKRESERNYELDEDDYELLEDNNITGFHRPKPGSKFK
RLKKAGRGAEGEERPGFSDEEEFDKYNHGGQRTAEEKLKRSLFGDDEGVPLEDIAEEQEQ
QEEEDEEIGEDDEMADFIVDEEDVDEDGAVVRKKKIKKRKVRQAPGVSSSALQEAHEIFG
DVDELLMLRKQGIARAASDAGGLGEKRLEDEFEPFILSEKYMTHKDDKIRETDVPERIQL
SEEVTGSPLIDDTSIEEESEWIHNQLLAAAAIPPQVAEMQAIKEKEIDKDDIGRVLTMMH
GQKLDLPFIAMYRKELCLSLLKDSDESSVGGEETPRIQWHKLLWTVHNLDKKWLLLQKRK
IALQMYYNKRFDEEARRIDDESRLELNQKIFESIIKVLKNANSEREVDDVDAKFNLHFPP
GEVEVEEGQFKRPMRKSLYSTCYKAGLWEVANKFGYSSEQLGSHLMKETTSSDLKDGTET
PEEVAANFTCAMFETPEDVLKGARSQAAVEIGCEPNVKKHIRGIFMDNAVVSTSPTPEGN
LSIDTHHELAGVKWLRNKPLSKFVDAQWLRIQKAEEEKLLQVTIKLPEHVQEELLNDAKE
NYVSDYVSKSAQLWNEQRKNILQDAFLNIILPSMEKEARALLTVRAKNWLAMEYGRHLWS
KVSVAPYQKKEVDNDTEDESDLRVMACCWGPGKPATTFVMLDSSGEVVDVLYAGSISSRS
QSVADKQRKQLDQQRLLKFMTDHQPHVVCLGTANLSCRPLKDDIYEVIFKIVEDHPRDVS
QDMNINIVFGDESLPRLYENSRISSDQLPAQPGIVRRAVGLGRYLQNPLAMITTLCGPGK
EILSWKLCPLEHFLTDDEKFEMVEQVMVDATNQVGLDINLAASHEWLFAPLQFISGLGPR
KASALQRAFVRAGSIINRKEIPMGKILRKKVFINAVGFLRVRRSGAAAASSHIMDLLDDT
RIHPESYDLAKNLAKDVRAEDFEHGEDEMDDDDLEMAIEHVRDKPEMLKALDIDAYDESY
FRNHGTRKWQTFHLIKMELLHGFQDWRVPFTEPSPEEEFCMLSGETEDSLPVGKLVQVSV
RQAQDGRVFCMFDSGLRGFIMADDFSDKGYEPEKVQEGDVLTCKIKNVNKQRFIVYLTCR
ESELSKRPLYIRNLDPYYKEDEVNRQSEQEKARKEKELAKKNFKPRMIVHPRFQNLTAEE
AKQYLADKDAGESIIRPSSRGPSFLTLTIKIFDDVYAHKDILESGKDHKDITSLLRLGKT
LTIDEKTFEDLDEVMDRYVDPLVSHLKNMLGYRKFKKGKKSEVDELLKAEKAQNPRRIVY
CFGISHEHPGTFILSYIRSSNPHHEYIGLYPKGFRFRKTDFDDIDRLVCFFQKNIDKPPP
DAPIGSVAARVPMKSPSWGSSADDGWRGQTNSERARSGGRSEYRNNYGGDNQDGHPSGLP
RPGRGGRGRGGRGRGRGGRDSRNDDFVSSPKWGGGGSGPRNDDGGGLSSFPGAKVQDSPG
TERFPGGWAGGAGGGASGGSWVSGSNDNGGDGWRGSTARLGA
NT seq 4809 nt   +upstreamnt  +downstreamnt
atgggaggaagaactgtggtctccgatgacgaagacgagattgaagaggaagaggacggt
cgagaagagaaagaagccgtcgaggtcgatgagagagatgacgaagacgatgatgaagaa
gatgaagagggtcaagatgaatatgagaaagatgacttcatagtggatgatgaagaagaa
gtggaggaagatgaagaagatgggaagaaggatgatagtgacggagagagacataggaaa
aagaagaagaagaaaagagagtcggagagaaactacgagcttgatgaagatgattatgag
ttgcttgaggataataatataactggttttcatcggccaaaacccggaagcaagtttaag
cgcttgaagaaggcaggaagaggtgctgagggagaggagaggcctgggttttctgatgaa
gaagaattcgataagtacaaccatggtggccagaggacagctgaggaaaaacttaaacgc
agtttgtttggtgatgatgaaggcgtaccactggaggatattgctgaagaacaggagcaa
caggaagaggaggatgaagagattggtgaagatgatgagatggctgactttatcgttgat
gaggaagatgttgatgaagatggtgcagttgtgaggaagaagaagatcaagaaaaggaaa
gtgcgacaagcaccgggcgtttcatcaagtgcacttcaggaagctcatgaaatatttggg
gatgttgacgagctcttgatgctgcgcaagcaaggcattgcaagggctgctagtgatgct
ggtggtcttggggagaagaggttggaagatgagtttgagcctttcattctttcggagaag
tacatgacacataaggatgataaaatcagggagacagatgttcccgagaggattcagttg
tccgaagaagttaccgggtctcctctaatagatgatacaagtatagaagaggagagtgaa
tggatacacaaccagttacttgctgctgctgccattccacctcaagttgcagaaatgcag
gcgatcaaagagaaagaaattgataaagatgacattggacgtgtcttgacaatgatgcat
gggcagaaattagatcttcctttcattgccatgtatcggaaggagctatgccttagtctg
ttgaaggattcagatgagtcgtcagtgggtggagaagaaacacctagaatacagtggcat
aagttgctctggactgttcataatttggacaaaaagtggttactccttcagaagaggaag
attgctctccagatgtattacaacaagcgatttgatgaggaagctcgaagaatagatgat
gaatcgagacttgaattgaatcagaaaattttcgagtctatcattaaggttctcaagaat
gcaaattctgaaagagaggttgatgatgttgatgccaagttcaatttgcatttccctcct
ggtgaagttgaggtggaggaagggcaatttaaaaggccaatgcgaaaatcattatatagt
acttgttataaggctggactgtgggaagttgctaacaagtttgggtatagctctgagcaa
cttgggtcacatttaatgaaggagacaacaagttcggacttgaaagatggaactgaaact
cctgaggaagtagctgcaaattttacatgtgctatgtttgagactccagaagatgtgctt
aaaggtgctcgttcacaggctgctgttgagattgggtgtgaacctaatgttaagaaacat
attcgtggcatatttatggacaatgctgttgtctctacaagccctacgccagaaggaaat
ttgtcaatagatactcatcatgagcttgcgggtgtgaagtggcttcgtaataagccatta
tctaagtttgtagatgcacaatggttacggattcagaaagctgaagaagagaagctcctt
caagttaccataaaattgcctgaacatgttcaagaagaattattaaatgatgctaaagaa
aactatgtaagtgattatgttagcaagtccgcacagctttggaatgagcagcgtaaaaac
atactccaggatgcatttttgaacattattctgccttcaatggaaaaagaagcaagagct
ctcttgacagttagggcaaagaactggcttgctatggagtatggaagacatttgtggagt
aaggtctctgttgctccttatcagaaaaaggaggttgacaatgacactgaggacgagtca
gatttacgtgtcatggcctgctgctggggacctggaaaaccagccactacttttgttatg
ttggattcatctggggaagttgtagatgtcttgtatgctggttctattagcagtcgatct
caatctgttgctgataaacagcgcaagcaacttgaccagcaacgtctcttgaagtttatg
acagatcaccaaccacatgttgtgtgcttgggaacagcgaatttgtcttgcagaccgctg
aaagatgatatctatgaggttatttttaagatagtggaagatcaccctagggatgtcagc
caagatatgaatatcaatattgtatttggcgatgaatctttgcctcgactatatgagaat
tcacgaatttcttcagatcagctacctgcccaaccaggtattgttaggcgtgcagtgggt
cttggacggtatcttcaaaacccattggcaatgatcaccacattatgtggaccaggaaaa
gaaattttgtcatggaagctgtgtcctctagagcattttctcactgatgatgaaaaattt
gaaatggttgagcaggtaatggttgatgctaccaatcaggttggtctggacattaattta
gctgctagtcatgaatggctttttgctcctctacaatttatttctggtcttggaccccgc
aaggcttctgcattgcaaagggcatttgtcagggctgggtccattatcaaccggaaggag
attccaatgggcaaaattctgaggaagaaagtttttattaatgccgttgggtttttgcgt
gttcgtcgcagcggggcagcagcagctagtagtcatatcatggatttattggacgacacg
agaattcatccagagtcatatgacctggcaaagaatttggccaaagatgttagagctgaa
gattttgagcacggagaggatgaaatggatgacgatgatctagaaatggcaattgaacat
gtaagagataagcctgaaatgctcaaagcgcttgatattgatgcatatgatgaatcttat
tttagaaatcatggaactagaaagtggcaaacctttcatcttataaagatggagctgtta
catggttttcaagattggcgtgtcccgttcacagaaccaagcccggaggaggagttctgt
atgctttctggtgaaactgaggattccttaccagtaggaaaacttgttcaggtttcagtt
cgtcaagcacaagatggccgtgtgttttgcatgtttgattctggtttgagaggatttatt
atggcagacgatttttcagacaagggttacgaacctgagaaagttcaagaaggtgatgtg
cttacttgcaagatcaagaatgtcaacaaacagaggtttattgtgtacctgacatgcaga
gaaagtgagctaagcaagagaccactttatattcgcaatcttgatccgtactacaaagaa
gacgaggttaaccgacagagtgagcaggagaaggctcggaaagaaaaagaacttgcaaag
aagaattttaagccaagaatgattgtgcatcctcgctttcagaacttgacagctgaagaa
gcaaaacagtaccttgcagataaggatgctggagagagcattattcgtccgagttctaga
ggaccatcatttttgactttaacaataaaaatttttgatgatgtctatgctcataaggac
atacttgaaagtggaaaagatcacaaggatatcacgagcttacttcgtcttggaaaaact
ttaacaattgatgaaaagacatttgaagatcttgatgaggtaatggatagatatgttgat
ccgttggtaagccacctgaaaaatatgcttggttaccgcaaattcaagaaaggcaaaaag
tcggaagttgatgaattattaaaggcggagaaggcacagaatccaaggaggatagtttac
tgttttggcatttctcatgagcatccgggaacatttattttatcatacattaggagctca
aaccctcatcatgaatatattggattgtatcccaagggttttaggtttcgaaagacagac
ttcgatgacattgatcgccttgtgtgtttcttccagaaaaatattgataaaccgccacca
gatgcccctatcggaagtgttgccgcaagggtccctatgaagagcccatcatggggctcc
tctgctgacgatggatggagaggtcaaacaaattcagaaagggcgcgatcaggaggaaga
tctgagtataggaacaattacggcggtgacaatcaggatggccatccaagtgggcttcct
cgtccagggcggggaggtcgtgggcgtggcggtcgtggaagaggacgtggtggccgggat
tcaagaaacgacgatttcgtttcttcgcctaaatggggcggcggtggctcaggtccaaga
aatgatgatggtggtggcttgagcagctttcctggggccaaagtacaagactcccctggt
acggagagatttcctggcggctgggctggtggggctggtggtggtgccagtggcggttca
tgggtcagtggtagtaatgacaatggtggtgatggttggcgaggtagcactgcgcggctg
ggtgcctaa

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