Asparagus officinalis (garden asparagus): 109819935
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Entry
109819935 CDS
T05243
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03440
Homologous recombination
aof03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109819935
03450 Non-homologous end-joining
109819935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aof03032
]
109819935
03400 DNA repair and recombination proteins [BR:
aof03400
]
109819935
DNA replication proteins [BR:
aof03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
109819935
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
109819935
BRCA1-C complex
109819935
NHEJ (non-homologous end-joining)
MRX complex
109819935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
PspAA
Motif
Other DBs
NCBI-GeneID:
109819935
NCBI-ProteinID:
XP_020241514
LinkDB
All DBs
Position
8
Genome browser
AA seq
720 aa
AA seq
DB search
MEDANDTLRVLIATDCHLGYMEKDEIRRFDSFESFDEICSIAEQKQVDFLLLGGDLFHEN
KPSRSTLVKAIEILRRYCLNDRPVPFQVVSDQTVNFPNKFGHVNYEDPHFNVGLPVFTIH
GNHDDPAGVDNLSSIDILSACNLVNYFGKMALGGSGVGQITLYPILIRKGATAVALYGLG
NIRDERLNRMFQTPHAVQWMRPEAQDECSVSDWFNILVLHQNRVKTNPKNAINEHFLPRF
LDFIVWGHEHECLVDPQEVAGMGFHITQPGSSVATSLIDGEAKPKHVLLLEIKGSQYRPT
KIPLKSVRPFEYMEVVLKDEPDIDPNDQASVLEHLDKVVGNLIEKSRKTTVSKSELKLPL
IRIKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKAAKKRQSLEDKLGDSERLRPEEL
NQQNIEALVAESNLKMEILPVNDLDIALHEFVNKDDKMAFYSCLQYNLEETRNKLNKEAD
SLKIEEEELIVKVGECMQERVKERTSHPKETMRITSNSQDLQGFRGKNTVGAISTNSFSD
DEDSRQLLSTSKPAGRGRKGAGASKASQDASNLSRSGASKRGRGRGSGGLKQTTLDAAMG
MRHSERSASVSASAAVRSIAEEEVQSPSSEETEKFEANEVADNSDLEETGRGKGRKRAAP
RGRGRGTSTAKRGKKSDMSSIHSMFMSKDNDDDDDDDENANRLKKAQTRVTRNYGAIRKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccaatgatacactccgggtgctcattgcaactgattgtcatctgggatat
atggagaaagatgaaattcgtaggttcgattcatttgagtcttttgatgagatctgctcg
atagctgagcaaaaacaggtagattttttgctccttggcggtgatctctttcatgagaac
aagccttccagatcaactttggtaaaggccattgaaattctgagacgctactgcctcaat
gaccgaccagtaccgttccaagttgtcagtgatcagactgtgaacttcccaaacaaattt
ggtcatgtgaactatgaggacccccatttcaatgttggcctacctgtttttactattcat
ggaaatcatgatgatcctgctggagtggataacctttcttccattgatatcctctctgcg
tgcaatcttgtgaattattttggcaaaatggcccttggtggctctggtgttggtcagata
acactctatcctatacttatcaggaagggtgcgaccgcagtggcgttgtatggccttggg
aacataagagatgagaggctaaacagaatgtttcagacaccacatgcagtacagtggatg
cggcctgaagctcaagatgaatgttctgtctcagattggtttaacattctggttcttcat
cagaatagggtcaagacaaatccgaaaaatgctattaatgagcatttcctgccaagattt
cttgattttatagtgtgggggcatgaacatgaatgccttgtcgacccacaggaagttgca
gggatgggctttcatatcactcaaccaggatcatctgttgcaacttcattgattgatggg
gaagcaaagcctaaacatgtacttctcttggaaattaagggcagtcaatatagacctacg
aaaatacctctcaagtcagtgagaccttttgagtatatggaggttgtgttaaaggatgaa
cccgacatagatcccaatgaccaagcgtctgttctggaacatctagacaaagttgtggga
aatctgatcgaaaaaagtaggaaaacaactgtcagcaagtcagaattgaagcttccgttg
atcagaataaaggttgactactctggattcatgactataaaccctcaaagatttggccag
aagtatgttggaaaggtagccaatccacaggacatcctcattttctcaaaggctgcaaag
aaacgacaatctcttgaagataaacttggcgattctgagaggcttcgtccagaggagtta
aatcaacaaaatattgaggctctagttgcagaaagtaatttgaaaatggagatacttcct
gttaatgatttggatatagcacttcatgagtttgttaataaagatgataagatggctttt
tactcttgtttgcagtacaatcttgaggagacgagaaataagttaaacaaagaagcagat
agcttaaagattgaagaggaagagctaatagtcaaagttggtgaatgcatgcaggaacgc
gtaaaggaaagaacgtcacaccctaaggaaacaatgagaatcacatccaactcacaagat
ctacagggctttagaggcaaaaatacagtaggtgctatcagtacaaattcctttagtgac
gatgaagattccaggcagttgctttcaacttcaaagcctgctggccgaggaagaaaagga
gctggggcatctaaagcctctcaagatgcatctaacctcagtagaagtggagcttctaag
agaggcaggggaagaggctctggtggcttaaagcagacgacccttgatgcagctatggga
atgcgccattctgagagatcagcttctgtctctgcatcagctgcagttagaagcattgcg
gaggaagaagtacaatctccttcaagcgaggagacagagaaatttgaagcaaatgaagtt
gctgacaattctgatctcgaagaaactggtcgagggaaggggcgaaaaagagctgctcct
agaggaagaggtagaggcacgtctactgcaaagagggggaaaaagtcagatatgtcttcc
atccatagtatgttcatgagcaaggacaatgatgacgacgatgacgatgatgagaatgcc
aatagattaaagaaagcccagactcgggtaacaaggaactatggtgcgatccgaaagaga
tga
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