KEGG   Asparagus officinalis (garden asparagus): 109819978
Entry
109819978         CDS       T05243                                 
Name
(RefSeq) spliceosome-associated protein 49 isoform X1
  KO
K12831  splicing factor 3B subunit 4
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109819978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aof03041]
    109819978
Spliceosome [BR:aof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    109819978
 Complex B
    109819978
 Complex C
   U2 SnRNP specific factors
    109819978
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 109819978
NCBI-ProteinID: XP_020241588
LinkDB
Position
8:13068696..13077274
AA seq 189 aa
MARNPACSVYIGNLDEKVSEKVLYEILVQVGRVVDLHIPRDKETNRMKGYAFAEYETEEI
ANYAVKLFSGLVCLHNKMLKFAMSGQDKFPQNNSTSLTPQANGPLTNNEPSPVPVQSQDK
WPSVSTQSMGNYGDSSSNYPVSPVYPQVSPNGLGGLSSSNYEYSRRVLGAVLNDVSHPAT
RRPATYPSY
NT seq 570 nt   +upstreamnt  +downstreamnt
atggcgaggaatccggcttgctctgtctacataggtaatttggatgagaaggtgagcgag
aaagtcttgtatgagattcttgttcaagtgggtcgagtagtggacctacatatacctcgg
gataaggaaactaaccgtatgaagggctatgcttttgctgaatatgaaaccgaggagatt
gcaaattatgctgttaagcttttctctggcctcgtctgccttcataataaaatgcttaag
tttgctatgtccgggcaagacaaattcccacaaaacaacagtacttcactcactcctcag
gcaaatggtcctctaacgaataatgaaccgagtcccgtgcctgtgcagtcacaagacaaa
tggccgtcagtttctacacagtcaatgggcaactatggggactcatctagcaactatcct
gtttcccctgtttaccctcaagtgtctcctaatggattaggtgggctcagcagcagcaat
tatgaatatagtaggcgtgttcttggggctgtgttgaatgatgtcagtcatcctgccacc
aggcgtcctgcaacatatccgtcttactaa

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