Asparagus officinalis (garden asparagus): 109820058
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Entry
109820058 CDS
T05243
Name
(RefSeq) light-mediated development protein DET1
KO
K10571
de-etiolated-1
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109820058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109820058
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109820058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Det1
Motif
Other DBs
NCBI-GeneID:
109820058
NCBI-ProteinID:
XP_020241708
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All DBs
Position
8:complement(5508534..5522690)
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AA seq
510 aa
AA seq
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MFRSNNVASRVFERQLITPRPGTSVNLMRQFYENFVPSYTIFDVECPDHFFRKITDDGKY
LISFSRNHHDLIVYRPIWMTYSCKGENCDLHAPPPKAKRFDSFFSQLYCVPLASGNEFIC
KDFFLYVESHQFGLFATSTAQNHDAPATEGAINGVPSFEKITFHLVRLEDGIILDEKVFC
NDFVNLVHSMGVFLHEDLLCIMSLRYQTIHILQIRDSGNLVDVRMIGTFCREDDELFLNS
HSPVTQGSSFLSGIKQRLLSFIFRKTWNEEADQTLRVQHLKKKFYVHFPDFVDLIMWKVQ
FLDRHHLLIKFGSVDGGVSRSTDQHPAFFAVYNMETTEFVAFYQNFSEELYKLYEHFYDH
FHATSRNSLHANFISSHSNNVHALDQICNLRHKANSSQFVKKILTMLPFPCQSQSPSPYF
DLSLFRYDEKLISATDRHRHATEHPIKFSSRRPPNSVKFKIKPGPEGEAGGQDSRPKRIS
SFLFHPFLPFALSIQQTFMQPTVVNIHLWR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaagcaacaacgtcgcttcgagggttttcgagcgccaattaatcactcctcgt
cctggaaccagcgtaaatctaatgaggcaattttatgagaatttcgtcccaagttatact
atatttgacgtagagtgcccagatcattttttccgcaagattacagatgatggaaaatac
ctgataagcttcagcagaaatcatcatgatctcattgtttacagacccatatggatgact
tattcatgcaaaggcgagaattgtgatttgcatgctccgcctccaaaggcaaagaggttt
gacagcttcttcagtcagctctattgtgtaccacttgcatcaggcaacgagtttatttgc
aaagatttttttctgtacgtggagagtcaccagtttggcttatttgcaacatcaactgca
caaaatcatgatgcacctgccactgaaggtgcaattaatggagttccttcttttgagaag
ataacatttcaccttgtaaggttggaagatggaattatattggatgaaaaggtgttttgc
aatgattttgttaacctggttcatagcatgggggtcttcttgcatgaggatttattgtgt
ataatgtcccttcgatatcagacaatacatattctgcaaattcgtgattctggaaacctt
gttgatgtacgaatgatagggacattctgtcgagaagatgatgagctctttcttaactcc
cattctccggtcactcagggaagttcttttctaagcggtatcaaacaacggctgctttcc
ttcatttttcgcaagacatggaatgaagaagcagatcaaactctgagggttcaacatctc
aaaaagaagttctacgttcacttccctgattttgttgaccttatcatgtggaaggtacag
tttttggatcgtcatcatcttctaatcaagtttggtagtgtagatggaggggtttcacga
agtaccgatcagcatccagcattttttgctgtgtacaacatggaaacaacagaatttgtt
gctttctatcagaatttttcagaagaactttacaagttgtatgagcacttctacgaccat
tttcatgcaacatcaagaaattcactgcatgcaaatttcatatcatctcattccaataat
gtccatgctcttgaccaaatttgcaatctcagacataaagcaaacagctcacagtttgtg
aagaagattttgactatgttacctttcccctgccagtctcagagtccttctccatatttt
gatctatcactgtttcggtatgatgaaaagttgatttcagcaacagaccgacatagacat
gccactgagcatccaatcaaattcagttcaaggagaccaccaaactcagtgaagtttaag
ataaaaccaggaccggagggggaagcaggcggtcaagatagtaggccaaagaggatctca
tcgttccttttccaccctttcttaccatttgctctttctatacagcagaccttcatgcaa
ccaacagtcgtcaatatccatttgtggagatga
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