Asparagus officinalis (garden asparagus): 109820153
Help
Entry
109820153 CDS
T05243
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109820153
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109820153
03110 Chaperones and folding catalysts [BR:
aof03110
]
109820153
04121 Ubiquitin system [BR:
aof04121
]
109820153
Enzymes [BR:
aof01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
109820153
Spliceosome [BR:
aof03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
109820153
Complex C
U4/U6.U5 tri-SnRNP related factors
109820153
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
109820153
Chaperones and folding catalysts [BR:
aof03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
109820153
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
U-box type E3
109820153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
zf-Nse
Motif
Other DBs
NCBI-GeneID:
109820153
NCBI-ProteinID:
XP_020241842
LinkDB
All DBs
Position
8:complement(26664561..26676193)
Genome browser
AA seq
596 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGAKSKENSTPFKRLPFYCCSLTFLPFEEPVCTADGSV
FDLMNIMPYIKKYGRHPVSGRPLKQQDLIPLTFHKNSDGEFQCPVLNKVFTEFTHIVAVR
TTGNVFCYEAIKELNLKTKNWKELLTDEPFTREDLITIQNPNALDSKVLLEFDHVKNSRK
LDDEDLMKMKEDPTYNINVSGDIKQMLQELGTEKGKEAALLGGGGSKAQKERAAALAAIL
SARSRLKEEAKSGANGEPKITQSFSIVDAASASVHGRSAAAAKAASSDKTAARVALHMAG
ERAPVNAKLVKSRFTTGAATRSFTSTSYDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGDL
NLELHCDITPRACENFITLCERGYYNGIAFHRSIRNFMIQGGDPTGTGKGGDSIWGKPFK
DELNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGMTTLAAME
KVPVDDDDRPLEEIKITSVTIFVNPYTEPDEEEEKEKAEEEERAAADDNDQVGSWFSNPG
TGATGSATVGGGVGKYLKARNTATEALGNNVLGSNDTSKKRKVDVSGVEYKNFSGW
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcagcacagcaaggatcggatgttcataacgaagacggagtgggcgact
gaatggggcggcgccaaatccaaggaaaactccactcccttcaagcgcctccctttctac
tgctgctctctcactttcctcccgttcgaggaacccgtctgcaccgccgatggcagcgtg
ttcgatctaatgaacataatgccttatatcaagaagtatggtaggcatccggtttcgggc
cgcccgctcaagcaacaggatctcattcccctaacatttcacaagaattcagatggagaa
tttcagtgtcctgttctgaacaaagtcttcacggaattcacacacattgttgccgtcagg
actacaggcaatgttttttgttacgaggcaattaaggaacttaaccttaaaaccaaaaat
tggaaggaattacttacagatgagccatttacaagggaagatttgataacaattcagaat
ccaaatgctcttgatagtaaagtccttctagagtttgatcatgttaaaaatagtcggaaa
cttgatgatgaagatttgatgaaaatgaaagaagatccaacctataacattaatgtgtct
ggcgatattaagcaaatgcttcaagagcttgggactgagaagggaaaggaagcagcttta
cttggtggaggtggtagcaaagcacagaaagaacgggcagctgcacttgctgccatttta
tctgcaagatctcgtctcaaagaggaggcaaaatcaggtgcaaatggagagcctaaaatc
acacaatctttcagtattgtggatgctgcatctgcttcagttcatggaagaagtgcagca
gcagctaaagcagcatctagtgataaaactgcagctcgagttgctttgcacatggcaggt
gaacgagcacctgtaaatgcaaaacttgtgaaaagccgttttactactggagctgctact
cgttcctttacatctacttcctatgatcctgtaacaaaaaatgagttcgaatatgtgaaa
gttgagaagaatcccaaaaagaaagggtatgttcagctgcatactacacatggagacttg
aatttagagttgcactgtgatataacaccacgtgcttgtgaaaatttcatcactctttgt
gaacgtggttactataacgggatagctttccatcgaagcataaggaactttatgattcaa
ggcggggatcccacaggcactggaaaaggaggtgactctatttggggtaagcctttcaaa
gatgaactgaattcaaaactgttgcattctggaagaggtgttgtcagcatggctaatagc
gggccgcatacaaatggttcccagtttttcatattatacaagtcggccaatcatcttaac
ttcaagcatacagtatttggtggagtagttgggggaatgactacactagcagctatggaa
aaagttcctgttgacgatgatgaccggcctttggaggaaataaagataacaagtgtcaca
atctttgtgaatccatacacagagccagatgaagaagaagagaaggagaaagcagaagaa
gaggagagagctgctgctgatgataatgaccaggtgggttcatggtttagcaacccaggc
actggagcaactgggtctgcgacagtaggcggtggagtcggcaagtatctcaaagcaagg
aacactgcaaccgaagctttggggaataatgtgcttggttcaaatgatactagcaagaag
aggaaagttgacgtatccggtgtagaatataaaaacttttctggttggtag
DBGET
integrated database retrieval system
