Asparagus officinalis (garden asparagus): 109820489
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Entry
109820489 CDS
T05243
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109820489
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109820489
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
109820489
NCBI-ProteinID:
XP_020242224
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Position
8:19465130..19468885
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AA seq
420 aa
AA seq
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MDPSKFLILSILTLLAHNCSCQSVPSHNEEGRRVVSVDDYFAKGDGATDDSKAFKRAWKE
TCSSSVSAVLVVPKRRRYLLEQLNFTGPCKSPVTFLIKGTLDAPLNRSVWNDKNRRLWIV
FDSVRNLVVKGGGTINGNGHIWWQNSCKRNKTLPCIGAPTALTFVSCNYLRVKNLRIKDS
QQFHVVVKDSREVKLSKLFIHAPEKSPNTDGIHLDHASNVVIRNCEIRTGDDCISIWTGS
KNVRVHKIVCGPGHGISIGSLGKNNTKNHVMNVKVDGAILNGTTNGVRIKTWQGGRGYAK
HITFKNIAMHSVKNPILIDQFYCDSKDPCHEQHDAVGIKQVVYKNIVGTSASKVSLKFNC
SKSLPCRGIKLQDINLVGEDGMRTHSSCSSVHLTKKGFVFPTPCVFGKNKTLVTRKSENW
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatccatccaagtttctaattctgtcgatcctcaccctcctcgctcataattgctca
tgccaaagcgttccgagccacaacgaagaaggccgtagagttgtgagtgtggatgattac
ttcgccaaaggcgatggagctaccgatgatagcaaggcatttaaaagagcctggaaagag
acctgctcgtcttcagtatcagctgtgcttgtggtgcccaagagaaggagatatttgctt
gagcaactcaacttcaccggcccttgcaagtctcctgtcacatttctgattaagggaacc
ctcgatgctcctttgaatcgatccgtatggaacgataagaatcgaaggctatggatcgta
tttgatagcgtgaggaaccttgtcgtcaaaggaggaggcaccatcaacggcaacgggcat
atttggtggcaaaactcttgcaagagaaataaaactctgccctgcatcggcgctccaacg
gcattgacctttgtttcatgcaattacttgagggtgaagaacctaagaataaaagatagc
caacaatttcatgtagtagtaaaagacagtagggaagtcaaactctcaaagctcttcatc
catgcaccagaaaagagtccaaacacagacgggattcatttggatcatgccagtaatgtt
gtcataagaaactgcgaaatcaggacaggtgatgactgtatttctatatggactggatcc
aagaacgtcagagttcataagatagtttgtgggcctggtcatgggataagtatcgggagt
ttagggaaaaataacacgaagaatcatgtcatgaatgtgaaggtggatggagctattctg
aatggtacaacaaatggagttaggatcaagacttggcagggaggtcgaggctacgcaaaa
catatcaccttcaagaatattgcaatgcacagtgtcaaaaatcctatactcatagatcaa
ttttactgtgactccaaggatccatgccatgaacaacatgatgctgtggggattaagcaa
gtggtgtacaagaatatagtgggaacgagtgcttcaaaagtgtccttgaaattcaactgc
agcaagagtcttccgtgtcgagggataaaattgcaggatatcaatttagtaggagaagat
gggatgagaacacatagttcgtgcagtagtgttcatttgactaaaaaagggtttgttttc
ccaaccccttgtgtttttggaaagaataaaactcttgtcacaagaaagagtgagaactgg
tag
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