Asparagus officinalis (garden asparagus): 109820600
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Entry
109820600 CDS
T05243
Name
(RefSeq) branchpoint-bridging protein isoform X1
KO
K13095
splicing factor 1
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aof03041
]
109820600
Spliceosome [BR:
aof03041
]
Complex A
Other components
Complex A specific factors
109820600
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH_1
Ras
Motif
Other DBs
NCBI-GeneID:
109820600
NCBI-ProteinID:
XP_020242354
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All DBs
Position
1:19799935..19832813
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AA seq
757 aa
AA seq
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MTAKVDSSSPVELTHGQSTGAPAVSTSNPKISKFGAKAGFVIPKNKLSGSLVPIFRGGSK
ADAGTDVKEESSKQVQRKTKWGADLTQDAAVRKGRALAYQTRVEQITQQLKSGAMEIEDD
QGSQSPKQDPSQQSATNHDGQQDKKFELLELEKREIIGEILRLNPSYKAPPEYKPLLKEG
KVAIPVKAYPGYNFIGLLLGPESNTQKRLEEETGAKIRVYGTKANTNDKREITQSDATGP
QGSYEELYVNVSADTYEKVDAAVSLIELLVTPVSGNAVVDSKNSTPVADVNQFAARPTSV
SPQSGQQQFQQQYSAPWFPNARSNSALGFFPLSATNNPVRFPPHNVPYAQPRTPLPLVNR
PQLPFQPMQQHPPNQVISPQHQAMPGQQPPLLYPSVSTQSNSQPPLIGPMPPPRPTPVNS
SGWSSSPSVVQLQRPNTQMTPQPFNPHIRPQQASLPPQNMPSNLIRPPSNFASFSPVTPL
SGPSPVLSSFGSSVQRPITPLTSIPPNINIPSSSVPAPAAAQARALSQSMVSLTRPPVPI
PTSSNGALPVSAPKPLRPISGDFTFQPLRAQVPGSPTTGKPSPLPLAAPQPPSFRPAAQN
LGQIPILPSPSPTPFSTNLSLSPVLPTSYFPANSVNAQPPPRFPFPNSNTGQLRPMAPAN
QMGPPSFSPGPRVPPSVNPMPARPPNYFQPHQTQLPLSNQPSGLVIPRSSGGNQVYDPFS
PTSISSARPQQGGEGLKAQKQDTDAEYEDLMASVGVK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaagttgattcatcctctcctgttgaactaacccatgggcagtctactggt
gcacctgcagtttcaactagtaatcctaagatctcaaaatttggggcaaaagctggattt
gttataccaaaaaacaaattgtctggttcattagttcccatttttcgaggtggtagtaaa
gcggatgctggcactgatgttaaagaagagagtagtaaacaggttcaaagaaaaacaaaa
tggggtgctgaccttactcaagatgctgctgtgaggaaaggaagagccttagcctatcag
actcgagtagagcagatcacccaacagctgaaatctggagctatggagattgaagatgat
caaggttctcagtcgccaaagcaggatcctagtcagcaatcagctactaatcatgatggc
caacaggacaagaaatttgaactcttggaattagaaaaaagagagataattggtgaaatt
ttacgcttgaatcctagttacaaggctccacctgaatacaaaccattactgaaagagggc
aaagttgcaattccggttaaagcctatccgggatacaatttcattggtttactattgggg
cctgagagtaatactcaaaaacgattagaagaagaaactggagctaaaatacgggtttat
ggtactaaagcaaatactaatgacaagcgggaaattactcagtcagatgcaacaggaccc
cagggttcttatgaggagctctatgttaatgtatctgcggatacatatgagaaagttgat
gctgcagtttcactaatcgagctgctagttacccctgtatctggtaatgctgtagttgat
tccaaaaattccactccagttgctgatgtcaatcaatttgcggcccgaccaacatcagta
tctcctcagtctggccaacaacagttccagcagcaatattctgccccttggtttcctaat
gctcggtctaattcagctcttggattctttccactctcagcaacaaacaatcctgtaagg
ttccctccacataatgttccgtatgcacaacctagaacgccattgcctcttgtcaacaga
cctcaattacccttccaaccaatgcaacaacatcctcctaaccaagtaatttcacctcag
caccaagccatgccaggtcagcagcccccactattatatccttcagtgtcaactcagtct
aattcacaaccaccactcattgggccgatgccccctcccagaccgactcctgtgaattct
tccgggtggtctagttccccttcagttgttcaattgcaaaggccaaacacacaaatgact
cctcaaccttttaatccacatataagacctcaacaggcttcattacctccacaaaacatg
cctagtaatcttatcagacctccatctaattttgcgtctttttctccagttacccctctt
tcaggtccttcacctgtcttatcttcttttggatcttcagtgcaaagacctatcactcca
ttaacttccatacctcctaatattaatataccttcaagcagcgtgccagctccagctgct
gctcaagcaagggcgctttcccaatctatggtgtctctaactaggccacctgtacctatt
ccaacaagttcaaatggtgctttaccagtttcagctccaaaacccctacgtccaatctca
ggtgattttacctttcaacctctcagagcccaagtcccagggtcacccaccactggtaag
ccttcccctcttccacttgcagcacctcaaccaccctcttttcgaccagctgcacaaaac
cttggtcagattcccatacttccatctccttctccaactcctttctctacaaatttgagt
ctatctcctgtacttcctacttcctacttccctgccaattcagttaatgcacaaccgcca
cccaggttcccatttccgaactcaaacactggtcaattaaggcctatggccccggcaaat
caaatgggcccaccgagcttttctccaggaccgagagtaccgccttctgttaatcctatg
cctgctcgtcctcctaattattttcaaccccatcaaactcagttacctctttcaaaccag
cctagtggcctcgttatcccgcgtagttcgggaggtaaccaagtctatgatccattctca
ccaacgtcaatttcctcggctcgtccacagcagggaggtgagggtctgaaggctcaaaaa
caagacacagatgcagagtatgaggatttaatggcttctgttggtgtgaagtaa
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