Asparagus officinalis (garden asparagus): 109820603
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Entry
109820603 CDS
T05243
Name
(RefSeq) RING-H2 finger protein ATL8-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109820603
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109820603
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
109820603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_16
zf-C3HC4_5
RINGv
Prok-RING_4
FANCL_C
Motif
Other DBs
NCBI-GeneID:
109820603
NCBI-ProteinID:
XP_020242355
LinkDB
All DBs
Position
8:complement(5553170..5554459)
Genome browser
AA seq
261 aa
AA seq
DB search
MSSPQISIPPPSSSSSSYNSSLLVIATLLAFVLAFTIVVHLILRLLARLSYVAPSPSLTH
INATSSNPASTTNTTTKLDPNPKILIDSLPLFTLSSLPQSPSSNCTICLSQFTLNEKLRL
LPPCLHAFHSSCIDAWLKSSPSCPLCRSLVQIQCTEPPPVAAPQVVEEEAQSNVEETESV
PWLKEYVDRLAVSASSSFNSMRFSSSSPFSSMRFSSWGSQSFDGDVSGSLELGESLRSEE
SGYLASSFKWIFGRGNFVITV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgccacaaatctccatccctcctccatcatcttcctcctcttcatacaactct
agcctcctcgtcatcgccaccctcctcgcctttgtcctcgccttcaccatcgttgtccac
ctcatcctccgcctcctcgctcgcctctcctatgtcgctccctctccctctctcacccac
atcaacgccacctcctccaaccccgcctccaccaccaacaccaccaccaaactcgacccc
aatcctaaaatcctaattgactcgctccccctcttcaccctctcctccctccctcaatct
ccttcatcaaattgcacaatttgcctctcccagttcaccctcaacgagaagctccgcctc
ctcccgccatgcctccacgcattccactcttcttgcattgatgcgtggctcaaatcatcc
ccttcatgcccactgtgtcggtcattggtgcaaattcagtgtacggagcctcctccagtc
gcggctccacaggtggtagaggaggaggctcagtcgaatgttgaggagacagagagcgtt
ccgtggttgaaggagtatgtggatcgactggcggtatcagcgtcatcctcattcaattcg
atgaggttttcatcatcgtcgccattcagttcgatgaggttctcgtcgtgggggagccag
agctttgatggggatgtgagcgggagtttggagttgggggagagtcttaggtcggaggag
agtgggtacctagcttcttcattcaagtggatttttgggaggggcaactttgtaattacg
gtgtag
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integrated database retrieval system
