Asparagus officinalis (garden asparagus): 109820751
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Entry
109820751 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109820751
03036 Chromosome and associated proteins [BR:
aof03036
]
109820751
Messenger RNA biogenesis [BR:
aof03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
109820751
Chromosome and associated proteins [BR:
aof03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
109820751
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
109820751
microRNA pathway
RISC loading complex
109820751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
Gly-rich_Ago1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
109820751
NCBI-ProteinID:
XP_020242539
LinkDB
All DBs
Position
1:complement(20321144..20332797)
Genome browser
AA seq
1103 aa
AA seq
DB search
MVRKKRSDLPGAGETSEPQGPQGQTGGQGGYQRPPERAPFPQQQGGGGRGRGWAPQSQQQ
PQYGGRGGGYYQGRGGGPQPREGMNPQYQGAPRAEYQGRGAQQYPEYQGRGGPQHQEYQG
RGGQQPRGGMPPQQFYSGHRGGSSMGGGRGAGFPAPGPLRSPAPELHQATEAPPYQATQQ
ASSQPSLPSRTHEMAVSEVTQQVQQLSVQTEVSTSQSIQPVASSKSMRFPLRPGKGSFGA
RCVVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAVMEELVRLYRETHLGGRLPAYDG
RKSLYTAGPLPFPSKEFQVTLTDEDDGSGTERRQRAFRIVIKFASRADLHHLEMFLAGRQ
ADAPQEALQVLDIVLRELPTARYCPVGRSFYSPDLGRRQQLGEGLESWRGFYQSIRPTQM
GLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSRPLSDSDRVKIKRALRGIKVEVTHRGNM
RRKYRISGLTSQSTRELTFPVDERGTMKSVVQYFQETYGFTIQHTNWPCLQVGNQQRPNY
LPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPRDRELDIVETVRHNAYHEDPYAQEFG
IKISDKLASVEARILPAPWLKYHDTGREKDCLPRVGQWNMMNKKMVNGGRVNSWMCINFA
RNVQESVARGFCHELAQMCQISGMQFSLEPVLPPLTARPDQVERALKARYHDAMGILRPQ
NKELDLLVVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFRMSKQYLANVALKINVK
VGGRNTVLVDAISRRIPLVSERPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYA
GLVCAQAHRQELIQDLFKIWQDPQRGSVSGGMIKELLISFKKATGQKPQRIIFYRDGVSE
GQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFAENHANQHSVDRSGNIL
PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQSLTNNLCYTYA
RCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSDSMATPAAGGRGPPXXXHFSSNNGTRV
PGAGSIRPLPALKDNVKKVMFYC
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaaaagagaagtgacctacctggtgctggtgagacatcggaaccacaagga
ccacaaggacaaactggcgggcaaggtggatatcagcgtcctcctgaaagagccccattt
cctcaacagcaaggaggtggtggcaggggacgaggttgggctcctcaatctcaacaacag
ccgcagtatggaggtcgaggtggagggtactatcagggtcgtggtggtggcccccaacct
cgtgaggggatgaacccacagtaccagggagccccacgtgctgaataccagggccgtgga
gcgcaacagtatccagaataccaaggccgtggagggccccagcatcaagaataccaagga
cgtggagggcaacaaccaagaggtggtatgccaccacagcagttttacagtgggcacagg
ggtggctctagcatgggtggggggcgtggggctggcttccctgctccaggtccattgagg
tcgccagcacccgagctgcaccaagcaactgaggctccaccttaccaggctacccagcaa
gcttcatcacaacctagtttgccttcaagaacccatgagatggctgtttctgaggtaaca
cagcaggttcaacagctttctgttcaaactgaagtttcaactagccagtctattcagcct
gttgcatctagcaaatctatgagattcccgttgcgtccaggcaagggtagctttggtgct
aggtgcgtggtgaaggcaaaccacttctttgctgaactccctgataaagaccttcaccaa
tatgatgtctcaattacacctgaagttacttcaagaggggtgaaccgagcagttatggaa
gagctggtaaggctataccgcgagacccatttaggaggccgtcttccagcgtatgatgga
aggaaaagcctatatactgctgggccactaccttttccctccaaagagtttcaagttaca
cttactgatgaagatgatggttcagggactgagaggagacagagagctttcagaattgta
ataaaatttgcttctcgtgctgatcttcatcatttggagatgtttttggctggaaggcag
gcggatgctcctcaagaagctcttcaagttcttgacattgttctacgtgaattgccgact
gctaggtattgtcctgttggtcggtctttctattcacctgatcttggaaggcggcagcaa
cttggtgaagggctcgagagttggcggggtttttaccagagcattcgcccaacacagatg
ggcctttccctgaatatcgatatgtcatcaactgctttcattgagccacttccagttatt
gattttgttactcaactcttgaaccgtgacgtgtcgaggccattgtctgattcagaccgc
gttaagattaagagagcacttaggggcataaaggttgaggttactcatcgcggaaacatg
cgaagaaagtaccgcatatctggtttaacctcacagtccactagagaattgacattccca
gtagatgaaagaggaacaatgaagtccgttgtgcaatatttccaagagacatatggtttt
accatccaacacacaaattggccttgcttgcaagttggcaatcagcagagaccaaattat
ctgcctatggaggtgtgcaaaatcgtggaaggtcaaaggtattctaagaggttgaatgaa
aggcagataactgctcttctcaaggtcacttgccagcgtcctcgagatcgtgagcttgac
attgttgagactgtccgtcacaatgcataccacgaggatccttacgcacaggagtttgga
attaaaattagtgataaacttgcatcagttgaggcacgaattttgcctgcaccatggctt
aaataccatgatactggaagggagaaagactgcttaccgagagtaggccaatggaatatg
atgaataagaaaatggtgaatggtgggagagttaatagctggatgtgcattaattttgca
cggaatgttcaagaaagcgttgctcgtggattttgccatgaactagcacagatgtgccaa
atttctgggatgcaattttctttggagcccgtgctcccaccattaactgctcggcctgat
caagttgaacgagctttaaaagcacgctatcatgatgcaatgggcatattgcgacctcag
aacaaagaactggatctgcttgttgtgatattgcctgataataatggctctctttacggg
gatctaaaacgtatttgtgaaactgaccttggattagtctctcaatgctgtctaacgaag
catgtatttaggatgagtaagcagtatcttgcaaatgttgctctgaagataaacgtaaag
gtcggtggtagaaacacggttcttgtggatgctatttctaggcgcatacctctggttagc
gaaagacctacgattatttttggtgcagatgtcacacatcctcatcctggagaagactct
agcccctccattgcagcggttgttgcctctcaagactggccagagatcacaaagtatgca
ggattggtttgtgctcaggcacatcgccaggagttgattcaggatctgtttaaaatttgg
caagatcctcagagagggtctgtctctggtggaatgataaaggaactacttatttccttc
aagaaagcaactgggcagaagcctcaaagaattatattttacagggatggggttagcgag
ggacaattctatcaagtcttactgtatgaacttgatgctataagaaaggcatgtgcatct
ctggagcctaattatcagccgccagtgacttttgtggtggttcagaaacgccaccacact
aggctgtttgcagaaaaccatgcaaatcagcattcagtcgataggagtggaaacattttg
ccaggcactgttgttgattccaaaatctgtcatccgactgaatttgacttttacctatgt
agtcatgctggtatccagggcacaagccgtcctgcgcattatcatgtattgtgggatgaa
aacaagttcactgcagatggtttgcaatcacttacaaacaacttatgctacacatatgca
aggtgcacaagatctgtatctattgtgccacctgcatattatgctcatcttgctgctttc
cgagctcgtttctacatggagcctgaaacatccgacagtgattccatggcaactccagca
gcaggaggccgtggcccgccnnnnnnnnnncacttcagcagcaacaacggcacacgggtc
ccaggggccggtagtattaggcctcttccagcactgaaagacaatgtcaagaaggttatg
ttctactgctga
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integrated database retrieval system
