Asparagus officinalis (garden asparagus): 109820962
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Entry
109820962 CDS
T05243
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00040
Pentose and glucuronate interconversions
aof01100
Metabolic pathways
Module
aof_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
109820962
Enzymes [BR:
aof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
109820962
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Motif
Pfam:
Glyco_hydro_28
Beta_helix
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
109820962
NCBI-ProteinID:
XP_020242749
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Position
8:19457240..19460406
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AA seq
400 aa
AA seq
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MSQYFFLILSILLLNIHNIQAEGLNRTRVVNVDDFRARRNGSIDDNEAFVKAWKETCSSS
ISSVFMVPQNREYLLKPINFSGPCKSNVKFLIKGRIEASLNPSNWNEYDPRHWIVFDNIK
KLVVTGGGIINGNGRIWWQNSCKKNEALPCTGAPTALTFSACKRLRVENLRIKDSQQMHV
VIEKSKKVVVSKLLIKAPEKSPNTDGIHVTHSENVIIRNCKIRTGDDCVSIVSGSKNIEV
RNITCGPGHGISIGSLGKYNTKAHVRNVVVDTAILNGTTNGVRIKTWQGGRGYAKSITFQ
NINMHNVKNPVIITQNYCDSKIPCHEQHRAVAISKVLFKNIKGTSASKVSVKLDCSKSVG
CKKIMLQDINLVGEDGDSTESCCKNVRWSKRGTVVPPLCV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaatatttctttcttatactctcaattctattgctcaacattcacaatatccaa
gctgagggtctcaacaggacaagagtggtgaacgtcgatgattttcgtgctagacgcaat
ggatctattgatgataatgaggcatttgtgaaagcttggaaagaaacctgttcgtcttct
atttcatctgtctttatggttcctcagaacagagaataccttctcaagccaattaatttc
tcaggcccttgcaagtctaatgtaaaatttttgatcaagggaagaattgaagcttcttta
aatccgtcaaattggaatgaatacgacccaaggcactggatcgtcttcgataatataaag
aagctagtagtcacaggtggagggatcatcaacggtaatggacgtatatggtggcaaaat
tcttgcaagaagaatgaagccctgccctgcacaggtgcaccaacggctttgacctttagt
gcatgcaaacgcttgagagtggagaacctgaggattaaagatagccaacagatgcatgta
gtaatagagaaatcgaaaaaggttgtagtctcgaaactcttgataaaggcaccagagaaa
agcccgaacacagatgggattcatgtaacacactcggagaacgtgatcataagaaattgc
aaaatcagaacaggtgacgattgtgtatcgatcgtgtctggatcgaagaatatcgaagtc
agaaacatcacttgtggtccgggtcatggcatcagcattggaagtttagggaaatataac
acaaaggcccatgtcagaaatgtagtggtggacacggccattttgaatggtacaacaaat
ggagttcggatcaagacttggcagggaggtcgcggctacgcaaaatcgataacctttcag
aacatcaacatgcacaacgtcaaaaatcccgtaatcataacacaaaactactgtgactcc
aagattccatgccatgaacaacatcgtgctgtggccatcagcaaagttctattcaagaac
atcaaggggacgagcgcttcaaaagtgtcagtgaaattggactgcagcaagagtgtcgga
tgtaaaaagataatgttgcaggatattaatttggtaggagaagatggagatagcacagaa
agttgctgcaaaaatgttcggtggagtaaaagagggacggtagttccacctctttgtgtc
tga
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