Asparagus officinalis (garden asparagus): 109821041
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Entry
109821041 CDS
T05243
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
109821041
Enzymes [BR:
aof01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
109821041
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
109821041
NCBI-ProteinID:
XP_020242826
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Position
1:complement(21050030..21056754)
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AA seq
684 aa
AA seq
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MLGLQSKQNPIQNPHTISTAHMGPLRKLRRVIENCCTSGGPATMSPIGVRLSVQDRYVTI
DNGILQLTLSKPDGIVTGVQYNGVDNLMEVLNKEDNRGYWDLVWSEPGSNGIFDVIKGTD
FRIIAEDDNRVEVSFTRMWDPSLKGTLVPLNIDKRFIVLRGSSGFYTYAIYEHLEGWPDF
DIAETRVAFKLRKDKFQYMALADNRQRIMPMPDDRLPGRGQQLAYPEAVLLTNPINPELR
DEVDDKYQYSIENKDNKVHGWVSFDPPIGFWQITPSNEFRTGGPVKQNLTSHVGPTTLAI
FFSAHYSGADLVPKFRGGEYWKKVFGPVFMYLNSSWIFTDPQLLWEDAKIQMQIEVDSWP
YNFPLSEDYPTIEQRGSVTGRLLIRDRHADDDYIYADSAYVGLALPGDTGSWQRECKGYQ
FWTRADAFGNFTISNVRTGDYNLYAWVPGFIGDYKFDATISITSGCFIDLGDIVYAPPRD
GPTLWEIGIPDRSAAEFYVPDPNPNYVNRLYINHPDKFRQYGLWERYAELYPDGDLVYTV
GESDYTKDWFFAQVTRKSDDQTSYIPTTWQIRFKLDTVYQNGSYKLRIAIASATYSELQV
RFNNLNINPPHFSTGLIGRDNSIARHGIHGLYRLYSIDVKSVWLVEGENTIFLTQSRSTS
PFQGIMYDYLRLEGPSGSDANERI
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcttggcctccaatccaagcaaaaccctatacaaaaccctcacacaatttcaacagca
catatgggtcctcttcgcaaactaaggagggtcatagaaaattgctgcacatcgggtggt
cctgctacgatgtcgccgattggggttcgcctttctgttcaagatcgatatgtgacaatt
gacaatgggatactgcaacttacgttgtcgaagcccgacgggatcgtcactggagttcag
tataatggtgtggataatttgatggaggttctgaacaaagaagataacagagggtactgg
gatctcgtttggagtgaacctggaagcaatggaatattcgatgtgattaaaggtactgat
tttaggataatagctgaagatgataatcgagtggaggtttcattcaccaggatgtgggat
ccttccctaaaaggcactcttgtacctttaaacattgacaagcggtttatagttctccga
ggatcttcaggcttctatacttatgcaatttatgaacacttggaaggatggcctgatttt
gatatcgcagagacccgggtagcattcaagcttagaaaagacaagtttcagtacatggca
ctagcagataatagacagaggatcatgcccatgcctgatgaccgtttgcctgggaggggt
cagcaattagcatatcctgaagccgtccttctgacgaatccgatcaatccagaactcaga
gacgaggtggatgacaaatatcaatactcgatagaaaacaaggacaacaaggttcatggt
tgggtttcttttgatccaccgattggtttttggcagatcacacctagcaatgagttcaga
actggaggacccgtcaagcaaaatcttacttcgcatgtcggtcccactacacttgctata
tttttcagtgctcattattctggggctgacctcgtgccaaaatttagaggtggagaatac
tggaaaaaggtttttggcccggtgtttatgtaccttaattcttcatggatttttacagat
ccacagcttctttgggaggacgccaaaattcagatgcagattgaagtagatagttggcct
tataattttcccctgtcagaggactatccaacaattgagcagagaggttctgttactggt
agactgcttatccgtgataggcatgcagatgatgattacatctatgcagattctgcgtat
gttggcttggctttaccaggagataccgggtcatggcaaagggaatgcaagggctaccaa
ttttggactagggccgatgcttttggaaatttcaccattagcaatgttcgaactggagac
tacaatctttatgcatgggttcctggttttattggagactataaatttgacgcaactata
tcgataacctctggatgttttattgatttgggggatattgtatatgcgcctccaagagat
ggtcctaccttatgggagataggtatccctgatcgttctgctgctgagttctatgttccg
gatcctaaccccaactatgttaacaggctctatataaatcatcctgacaagtttaggcaa
tatggcttatgggagagatatgcagagttatacccagatggtgaccttgtttatactgtt
ggtgagagtgattacacaaaggattggttctttgcccaagttacaaggaagagtgacgat
caaacctcctatattccgaccacttggcaaataagattcaaacttgacaccgtttaccaa
aatggaagttacaagctaaggatcgccattgcatcagcgacatattcagaattacaagtc
cgcttcaacaatttgaatataaatcctcctcatttttcaacggggctaattggcagagac
aactcgattgcaagacatggaatccatggattatatcggttgtatagcatcgacgtgaag
agcgtttggcttgttgaaggcgagaatactattttcctcacacaatcgaggagcacgagc
ccttttcaggggattatgtacgattaccttcgtttagaagggccatctggctctgacgcg
aatgagaggatatga
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