Asparagus officinalis (garden asparagus): 109821831
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Entry
109821831 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: cellulose synthase-like protein D5
KO
K00770
1,4-beta-D-xylan synthase [EC:
2.4.2.24
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof00520
Amino sugar and nucleotide sugar metabolism
aof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
109821831
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
aof01003
]
109821831
Enzymes [BR:
aof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.24 1,4-beta-D-xylan synthase
109821831
Glycosyltransferases [BR:
aof01003
]
Polysaccharide
Structural polysaccharide
109821831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
109821831
NCBI-ProteinID:
XP_020243574
LinkDB
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Position
8:122122889..122127902
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AA seq
989 aa
AA seq
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MARRASSPASPVTITISPQSNRVTHGSHLSGNVTGVAPFRSIGITSGNPNSPIAARPISA
RYSASPKDETREVTSESVHYTVHIPPTPDHQPFSVSSSVPEQKRSFISGTIFTGGFNSVT
RGHVVESMEVEKSAGMFCRMNGCDEEALVSKMPCECGFLICKDCFKECVQGSGQCPGCKE
PYKGEEEEEEEEEMEGGESGAVSAEKIAVVDFRAGRRRSVVKSMVKNEFDHNRWLFETKG
TYGYGNALWPKDGSNGGGGGGVGFKGFEELPDFGGTSKRPLTRKVGVSQAVLSPYRLLIA
IRLVALGFFLAWRIRHPNHEAIWLWALSVTCELWFAFSWLLDQLPKLNPINRSTDLSVLS
LRFESPSPRNPKGRSDLPGVDIFVSTADPDKEPPLVTANTILSILAVDYPVEKLACYLSD
DGGSLLTFEALAETASFARIWVPFCRKHKIEPRNPEAYFGVKRDFLKNKVRVDFVRERRK
VKREYDEFKVRVNSLSESIRRRSDAYNAHEELRAKKMQIEGEIVAEETVKVPKAVWMSDG
SHWPGTWFSGEPDHSRGDHAGIIQAMLAPPNSEPVIGTESSNSNVIDTTXXXXXXPMLVY
VSREKRPGYDHNKKAGAMNALVRTSAIMSNGPFILNLDCDHYIYNSLALREGMCFMLDRG
GDRICYVQFPQRFEGIDPNDRYANHNLVFFDVTMRAMDGLQGPMYVGTGCIFRRTALYGF
SPPRATEHHGWFGRKKIKLLLRKPTMGKKSDKAQMNDDEEDIESLLMPKKYGNSASLVAS
IPIAEYQGRLLQDMPGVSQVPPSLAALAGARRTPSMPPLSPQAIPLQGCRWRERAVLGSC
AWATSAHRPAVLKESSKLVXRVDISFTLTSKPATXDNRTDLFADLYVLRFELLMRLPPIT
IMMVNTIAIAVGCSRALYSPFPQWSKLLGGVFFSFWVLCHLYPFAKGLMGRRGKVPTIVF
VWSGLISIVVSLLWVYISPPVGAKDYMNL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggctcggagagcctcatctcctgcatccccagttacaataacaatctcccctcaatcg
aaccgagtaactcacggaagccacctcagcggaaatgtgaccggagttgcgccatttcgg
agcatcggcatcacgagcggcaaccccaactcaccgatcgcggctcgtccgatcagcgct
cggtactccgcttccccaaaagacgaaacccgagaagtcacttccgaatcggttcactac
acagttcacatcccgccaaccccagatcaccagccgttttcagtatcaagctcagttcca
gagcaaaagaggagcttcatctccggcacaattttcaccggggggttcaattctgtgacc
cgaggccatgtcgtcgagtccatggaagttgagaagtcagccggaatgttctgccgaatg
aacgggtgtgatgaggaggcgttggtgtcgaaaatgccctgtgagtgcgggtttttgata
tgcaaggattgctttaaggagtgcgtccagggatccgggcagtgcccgggttgtaaagag
ccttataaaggcgaagaggaggaggaggaggaggaggagatggagggaggcgaaagcggg
gccgtttctgcagagaaaatcgcggtggtggattttagggcggggaggaggagatcggtg
gtgaaatcgatggtgaagaatgagtttgatcataatcgatggctgtttgagacgaagggg
acttatggatatgggaatgctttgtggccgaaggatgggagtaacggtggaggaggagga
ggagtagggtttaaggggttcgaagagctgccggattttggagggacgagtaagcggccg
ttgacgaggaaagttggggtttctcaggctgttctcagtccttacaggctgctgatcgcg
atcagactcgtagctctcggcttcttcttggcctggcgaattcgccatccaaaccatgag
gcaatttggctctgggcactctccgtcacctgtgagctctggttcgctttctcatggctc
ctcgaccaactcccaaaactcaaccccattaaccgctccactgacctctccgtcctctcc
ctccgcttcgaatccccctcccctcgaaaccccaaaggccgctccgacctacctggtgtt
gacatcttcgtctctaccgcagaccctgataaagaacccccactcgtcacggccaacacc
atcctctccattcttgctgtcgattaccctgttgaaaaactcgcttgctatctctctgat
gatggtgggtccctcctcacttttgaagccctggctgagactgccagcttcgcaaggatt
tgggttcccttctgtaggaaacataagattgagccgaggaatcctgaggcatattttggg
gtgaagagggatttcttgaagaataaggtgagggtggattttgtgagagagaggaggaag
gtgaaaagggagtatgatgagtttaaggtgagggtgaactcgctttcggagtctattagg
aggaggtctgatgcttataatgctcatgaggagcttagagctaagaagatgcagattgag
ggagaaattgttgctgaagagactgtgaaggttccgaaggctgtttggatgtcggatggc
tcgcactggcctggaacttggttttccggtgagcctgatcattccagaggcgatcatgcg
ggcataattcaggctatgctggctcctccaaattcggaacctgtaattggcactgaatcc
tcaaacagcaacgtgatcgatactaccnnggnnnnnnnnnnnnnnccaatgctcgtctat
gtctcgagagagaagaggccgggttatgaccacaacaagaaggcaggagccatgaatgcg
cttgttcgaaccagtgctataatgtcgaatggcccattcattctgaatctggactgtgat
cactatatctacaattcattggcgttgagagagggaatgtgttttatgcttgatcgaggt
ggtgaccgaatctgctatgttcagttccctcagaggttcgagggtattgatcccaacgac
cgttatgcaaatcataacctggtatttttcgatgtcacgatgagagcaatggacgggctg
caaggcccaatgtatgttggaaccggctgcatctttcgacgtactgcattgtatggcttc
agccctcctcgagcgacggagcaccatggctggttcggtcgaaaaaagatcaaacttttg
ttaaggaagccgacgatggggaagaagagcgataaagctcagatgaacgacgatgaggag
gacattgaatcattgctgatgccgaagaaatatggcaactctgccagcctcgtcgcatca
ataccaatcgcagagtaccagggccgacttctccaagacatgccgggagtttcccaggtt
ccgcccagcttggccgcgttagctggcgctaggagaaccccctcgatgccgccactgtcg
ccgcaggctattccgctccaaggatgtcggtggcgcgaacgagcagttctcggctcatgc
gcctgggcgaccagcgcgcaccgcccagcagtcctcaaggaatcctcaaagctcgtcngc
cgcgtcgacatctccttcactctgacgtcaaaaccggccacgnacgacaatcggacggac
ctcttcgccgacctgtacgtactgaggtttgagctcctgatgcgcctgccgccgatcacg
atcatgatggtgaacacgatcgcgatcgccgtcgggtgctcgagggccctgtacagcccg
ttcccgcagtggagcaagcttttgggtggggttttcttcagtttctgggtgctgtgtcat
ctgtatccgtttgcaaaggggttgatggggaggagagggaaagtgccgaccattgtgttt
gtttggtctgggttgatttctattgtggtgagtttgctttgggtgtacattagtcctcct
gttggagctaaggactacatgaacctgtag
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