Asparagus officinalis (garden asparagus): 109821912
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Entry
109821912 CDS
T05243
Name
(RefSeq) DNA damage-binding protein 2-like
KO
K10140
DNA damage-binding protein 2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03420
Nucleotide excision repair
aof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
109821912
09124 Replication and repair
03420 Nucleotide excision repair
109821912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aof04121
]
109821912
03400 DNA repair and recombination proteins [BR:
aof03400
]
109821912
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
109821912
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
109821912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WDR55
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_EML
WD40
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
PQQ_3
Beta-prop_IFT140_1st
WD_LRWD1
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
WD40_WDHD1_1st
Anti-TRAP
Motif
Other DBs
NCBI-GeneID:
109821912
NCBI-ProteinID:
XP_020243658
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All DBs
Position
8:128020161..128032560
Genome browser
AA seq
359 aa
AA seq
DB search
MPPRRNPSSSRILVERDSESEPESESEPEEAVPSEEEEEEEEEESKKVEEREEAQNDGKK
KVPITISLKKVCKVCKGTGHQAGFSGATYIDCPKKPCFLCKKPGHTTMSCPHRVAMEHGV
IPAPRRNNQTSMDFVFERQIKATVQKIKPAFVIPNQVDCGIIRLHSRRVTSLEFHPTKNT
VLLSGDKKGQLAVWDYGKLHEKTVYGSIHSCIVNNIKFNSTNDGTFYTSSSDGTICCTDL
ETGIPHTLMDCNPNGWNGPATWRMLYGMDINSDKGLLLVADNFGYVYLLDGRSKMRTGEP
ILMHKKGSKVVGLHCNPLQPDVLLSCGNDHFVSSFINLFNPGFSHCLAELSRSTKELDD
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcggcgaaacccctcctcctctcggatcctcgtcgaacgagactccgagtcc
gaacccgagtccgagtccgaacccgaagaagcagtcccaagcgaagaggaagaggaagag
gaagaagaggagagcaagaaggtcgaagagagagaagaggctcagaacgatggaaagaag
aaagttccgatcactatcagcctcaaaaaagtttgcaaggtttgtaaagggacggggcat
caagcaggatttagtggcgctacttacattgattgcccgaaaaaaccttgctttctctgc
aaaaagccaggccatacaacaatgtcttgtccgcatcgagtagcaatggagcatggggtc
attcctgccccgagaaggaacaatcagacgtcaatggatttcgtatttgagcggcagata
aaagccacggttcaaaagataaagcccgcctttgtgattccaaatcaagtggattgtggg
atcatcagactccattctaggcgcgtaactagtttggagtttcatcccactaagaataca
gttcttttatcaggagataagaaagggcaacttgctgtgtgggattatggcaaattacat
gaaaagacagtatatggatccattcactcttgcatagttaacaatatcaaatttaattcg
actaatgatggaacattctatacatcatcatctgatgggaccatttgttgcactgacttg
gagaccggaataccacatactttgatggattgtaatccaaatggatggaatggtccagca
acttggcgaatgctgtatggtatggatattaactcagataaaggccttttgctagtggca
gataattttggatacgtatacttgttggatggacgttcaaagatgagaacgggagaacca
attctaatgcataaaaagggtagcaaagtggttgggcttcattgtaatccccttcagcca
gatgttcttctaagttgtggaaatgatcattttgtgagttcattcatcaatttgtttaat
ccaggattttctcattgccttgcggagctttcacgttcaacaaaggaacttgacgattga
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