Asparagus officinalis (garden asparagus): 109822014
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Entry
109822014 CDS
T05243
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109822014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aof03019
]
109822014
03110 Chaperones and folding catalysts [BR:
aof03110
]
109822014
03029 Mitochondrial biogenesis [BR:
aof03029
]
109822014
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109822014
Enzymes [BR:
aof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
109822014
Messenger RNA biogenesis [BR:
aof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
109822014
Chaperones and folding catalysts [BR:
aof03110
]
Heat shock proteins
HSP60 / Chaperonin
109822014
Mitochondrial biogenesis [BR:
aof03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
109822014
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
109822014
Exosomal proteins of other body fluids (saliva and urine)
109822014
Exosomal proteins of breast cancer cells
109822014
Exosomal proteins of colorectal cancer cells
109822014
Exosomal proteins of bladder cancer cells
109822014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
109822014
NCBI-ProteinID:
XP_020243759
LinkDB
All DBs
Position
8:99868989..99878612
Genome browser
AA seq
583 aa
AA seq
DB search
MPLSFSSSIFTSPVLPFFRAQQAKWVQNPFRNSQKSRGFNVRAGPKRISFDNDCRRALQS
GIDKLADAVSVTLGPKGRNVVLDDPGIPKVINDGVTIARAIELLDPIENAGATLIQEVAS
KTNDSAGDGTTTAIILAREIVKLGMLAIASGANPIALKRGIDRAVSELVQILRTKCLHIS
RKEDIKAVASISAGNNDFIGDLIAGAIDQIGPDGVITIESSSSFDTTVEVQEGMKVDKGY
LSPHFITNQNKSIVEFQNAKVLVTDQKITSIKDIIPLLEKTTQLSVPLLIIAEDVSSEVL
ATLILNKLRGIINVAAIKCPGFGEGKKGILQDIALMTGADFLASDLGLTLEDVTSDQLGI
AQKITITSNSTTIVADPSTRAEIQARISQIKKDLAESDNSNLSRKLSERIAKLSSGVAVI
KVGAATEAELEDRKLRIEDAKNATFAAIDEGIAPGGGATYVQLSKHIPKIRKLIEDSEEK
IGADIVEKALLVPAMSIANNAGVDGAVVVEKLLSSEWRIGYNAMTDEYQDLLESGVIDPC
KVSRCALQNAASIAGVILTTQAVLVEKVKQPKPAVPLVPGISP
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctctttctcttcttcaatcttcacttcaccagtcctcccatttttcagagct
cagcaagcgaaatgggtccagaacccatttcgaaattcacagaaatcaaggggttttaat
gtgagagcaggacccaaaaggatatcttttgataatgactgcagaagggctcttcagtct
gggattgataagcttgctgatgccgtctcagtcactttgggacctaaagggcgtaatgtt
gttcttgatgacccgggaatacctaaagtaatcaatgacggtgttacaattgctcgagct
attgaactcctggacccaattgagaatgcgggtgcaacgttaatccaggaggtagcctct
aagacaaatgactcggctggtgatggcactaccactgcaattatcttggctcgagaaatt
gttaaattagggatgttagcgattgcttcgggggctaatccaattgctttgaagagagga
attgatagagcagttagtgaacttgttcaaatcttaaggactaagtgtcttcatataagc
aggaaggaggatataaaagccgtggcctcaatttctgctggaaataatgatttcattgga
gatttaattgctggagctatagatcaaattggtcctgatggggttataacaattgaatca
tcctcttcttttgataccactgttgaagtgcaagaaggaatgaaggtagacaagggttac
ctgtctccccatttcattacaaaccagaacaaatcaattgtggaatttcagaatgctaaa
gtgttagtaactgaccaaaagataactagtatcaaagacatcattcctttgttagaaaag
accactcaactgagtgttccattgttaattattgctgaggatgtttcaagcgaagtgctg
gcaactctgatccttaataagctgcgaggaataataaatgttgcagccatcaagtgtcca
gggtttggagaggggaagaagggtattttgcaagatattgctctaatgactggtgctgat
tttcttgctagtgacttggggttgacgcttgaagatgttacttcagaccagctcggtatt
gctcagaagattactatcactagcaattccacaaccattgtagctgacccatctaccaga
gctgagatccaggcacgaatttcacaaataaagaaggatttagctgaatcagataatagc
aatctgtcaagaaagctctctgaaaggatcgcaaagctctctagtggtgtagctgtgatc
aaggtgggagcagccactgaggctgaacttgaagataggaagctcaggattgaggacgca
aagaatgctacctttgctgccatagatgagggaatagcacctggaggtggtgcaacatat
gtacaattatcaaagcatattcccaaaataagaaaattgatcgaagattcagaagagaaa
attggcgctgacatagttgaaaaggcacttctcgtaccagccatgtcaatagcgaacaac
gcaggagttgatggcgcagttgtcgttgagaaacttctttccagtgaatggcgaatcgga
tacaatgcaatgactgacgagtaccaagatcttcttgaatctggtgttatagatccatgc
aaggtttcgaggtgtgcactccaaaatgctgcctctattgccggagtaatcctcacaacc
caagctgttcttgttgagaaagtaaagcagccaaagcctgcagttcctcttgttcctgga
atctcaccttaa
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