Asparagus officinalis (garden asparagus): 109822421
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Entry
109822421 CDS
T05243
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109822421
04121 Ubiquitin system [BR:
aof04121
]
109822421
Enzymes [BR:
aof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
109822421
Membrane trafficking [BR:
aof04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
109822421
Ubiquitin system [BR:
aof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
109822421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
Rad50_zn_hook
zf-RING_16
Prok-RING_1
zf-Vps39_C
Prok-RING_4
zf-RING-like
zf-Nse
zf-RING_Vps41
CxC4
Motif
Other DBs
NCBI-GeneID:
109822421
NCBI-ProteinID:
XP_020244202
LinkDB
All DBs
Position
8:complement(129904499..129905624)
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AA seq
231 aa
AA seq
DB search
MEVNGARGFDHPPASKTAIESMPTIQIADCHVGEDSYCAVCKEKFELGNDAREMPCKHIY
HQDCILPWLTLRNSCPVCRHELPSEVRRRAGSEIDSEEESVGLTIWRLPGGGFAVGRFSG
GRRPGERELPVVYTEMDGGFNSGGAPRRISWTSRGNRRRERGGFGQVLRNLFSLRCFGGD
RSSSSSSVAASRSLSSRRNLRAPIFRSSRSSRSHSNNWALEDGTGNTISRW
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcaacggcgcgcgaggattcgatcatccgccggcatcgaaaactgcgattgag
tccatgcccacgatccaaatcgccgactgccacgttggcgaggactcctactgtgcagtc
tgcaaggagaaattcgaactaggaaatgatgcgagagaaatgccctgtaaacatatttac
catcaagattgcatcttgccctggctcacgcttcggaattcgtgcccagtttgcagacac
gagctgccgagcgaggttcggagaagggcaggatcggaaattgatagtgaagaggagtct
gtggggctcaccatctggagactgccaggtggcggcttcgccgtcgggaggttctcgggt
gggaggaggccaggggagcgagagcttccggttgtttatactgaaatggatggcgggttt
aactccggtggggcccctagaagaatttcatggacttccagagggaatcgaaggagggag
cgtggaggatttgggcaagttcttcgtaacttgttcagtcttagatgttttggtggtgat
cgatcgtcatcttcgtcttctgttgctgcttcaagatctttgtcttcgaggagaaaccta
agagctcctatatttaggagctcgaggagctcaaggagtcatagcaacaattgggcattg
gaggatggaactgggaatacaatttcaagatggtga
DBGET
integrated database retrieval system
