Asparagus officinalis (garden asparagus): 109822461
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Entry
109822461 CDS
T05243
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
KO
K17302
coatomer subunit beta'
Organism
aof
Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aof04131
]
109822461
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aof04147
]
109822461
Membrane trafficking [BR:
aof04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
109822461
Exosome [BR:
aof04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109822461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR75_2nd
WD40_like
Beta-prop_Nup120_160
TPR_1
WD_LRWD1
HEAT_GCN1
TPR_2
TPR_8
TPR_IF140-IFT172
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
109822461
NCBI-ProteinID:
XP_020244248
LinkDB
All DBs
Position
8:11774203..11791589
Genome browser
AA seq
907 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGSVCIWDYQTQTMAKSFEVTELPV
RSAKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHTHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHFKGVNCVDYFTGGDRPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSTVCFHPE
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWAVGYSRGSRRVVIGYDEGTIMIKLG
REVPVASMDSSGKIIWAKHNEIQTVNIKTVGADYEVTDGERLPLAVKELGSCDLYPQSLK
HNRNGRFVVVCGDGEYIIYTALAWRNRSFGSALEVVWSSEGEYAVRESTSRIKIFSKNFQ
EKRSIRPTFSAERIFGGALLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLLTI
ASDSSFYILKYNGDIVSSYLESGNSGDEQGVEDAFEMLHEINERVRTGIWVGDCFIYNNA
SGRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
RGDLDRASDVLQSIPKEHHNSVARFLESRGMPDDALKVATDPNYKFDLAVQLERLDIAKE
IAVEVQSESKWKQLGKLAMSTGKLDMAEECLSQAMDLSGLLLIYSALGDAEGIAKLASLA
KEQGKNNVAFLCLFLLGKLEDCLQLLVDSNRIPEAALMARSYLPSKVSEIVAIWKKDLIK
VNPKAAESLADPEEYSNLFEDWQVALAVESNTTQNRGSYLPAEEYPIHAEKLNVNLVEAF
KNMQVDEAGFPLENGDLGHEACFQVSDEIGEEDGQEAVEVVANESTDGDVLVNGNNGDEE
YVLTPRG
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcagacttgaaattaagaggaaacttgctcaaaggtcggagagagtgaagtcg
gtagatctacatccaacagagccatggattttagcgagtctttactctgggagtgtttgc
atctgggattaccaaacacagactatggcaaagtcatttgaggtcactgaactgccagta
cgctcagcaaaatttattgcacgcaaacagtgggttgtcgctggagcagatgatatgttc
attcgtgtttacaattataatacaatggataaagtgaaagtttttgaggcacacacagat
tacatcaggtgtgtagctgtccacccaacccttccatatgtgttgtcgtcatctgatgac
atgttgataaagctctgggattgggagaaaggttggatgtgtactcagatttttgaagga
cacacacactatgtgatgcaagtgaccttcaacccaaaagacactaatacttttgcaagt
gcttctctggatcgcacaataaagatctggaatcttggttctcccgatccgaacttcacc
ttagatgcacattttaagggagtgaattgtgtagattactttacaggtggtgataggcca
tatttaatcactggttctgatgatcatactgccaaggtctgggattaccaaacgaagagc
tgtgttcaaactcttgagggccatacgcacaatgtttcgactgtctgtttccatcctgag
cttcctataatcattacaggctcagaggatggaactgttcgaatatggcatgcaacaaca
tataggcttgagaacacgctaaattacggtcttgaacgagtttgggctgtgggatactcg
agaggttcaaggagagtggtaattggatatgatgaaggaaccataatgataaaacttggt
cgtgaagttccagtagctagtatggacagcagtggtaagatcatatgggcaaaacataac
gaaattcaaactgtcaatattaagacagtcggagcagactatgaggttacagatggagaa
agattgcctttggctgtgaaggagctggggagctgtgacctctatccacaaagcttaaag
cataaccgtaatggtagatttgtggttgtttgtggagatggtgaatacattatttacaca
gcgctggcatggagaaacagatcttttggctccgctctcgaggttgtgtggtcatctgag
ggtgaatatgcggtcagagaaagcacatcaagaataaaaattttcagcaaaaactttcag
gagaagagaagtataagacccaccttttctgctgagcgtatctttggaggagctttactt
gcaatgtgctcgaatgacttcatttgcttttatgactgggctgaatgcagattgatacgg
cgcattgatgttaatgtgaaaaatctctattgggctgatagtggtgacctacttactatt
gcaagtgactcatcattctacattttaaagtataacggtgacattgtttcttcttatcta
gaaagtggaaactcaggtgatgaacaaggtgttgaggatgcttttgaaatgcttcatgaa
ataaatgagcgtgtgcgaactggaatctgggttggggactgtttcatttacaataacgct
tccgggagactgaattattgtgtcggtggagaggttaccaccatgttccacctggaccgg
ccaatgtacttgttgggatatcttgctagtcagagcagggtgtatctcattgacaaggag
ttcaatgttatgggttacactttactacttagtttgattgagtataaaactctagtgatg
cgtggggatctggatcgtgcaagtgatgttttacagtcaattcctaaggagcatcacaac
agtgtggcccgtttcttagaatctcgaggcatgcccgatgatgctttgaaagtggcgacg
gatcctaattacaaatttgatcttgctgtacagcttgagcgattggatatagctaaggag
atagctgtggaggtccaaagcgaatcaaaatggaagcagctagggaagcttgcaatgtcc
acaggaaagttagatatggctgaggaatgcttatcacaagcaatggatctgagtggtttg
ttacttatttattctgctctcggtgatgccgaaggaattgctaaacttgcatctcttgct
aaagaacaagggaagaacaatgtggctttcctttgtttatttttgttaggaaaattggag
gactgccttcaattgttggttgatagcaaccgtattccagaagctgccttgatggcgcgt
tcttatcttccaagcaaagtctcagagatcgttgcaatttggaagaaagatctcattaag
gtcaatccaaaggctgcagagtccttggctgatcctgaagaatactcaaacttatttgag
gactggcaggttgctcttgctgtagagtctaataccacccaaaacagaggtagctatctg
cctgctgaggaatacccgatacacgctgaaaagttaaatgtgaatcttgtggaagcattc
aaaaatatgcaagtggatgaagcaggcttccctcttgaaaatggagatttgggtcatgag
gcatgctttcaggtgtcagatgaaataggagaagaggatggccaagaagctgttgaagtg
gtcgctaatgagtctacagacggtgacgtccttgtcaacggaaataatggtgacgaagag
tatgtccttactccccgaggttag
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