Asparagus officinalis (garden asparagus): 109822462
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Entry
109822462 CDS
T05243
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
109822462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aof03400
]
109822462
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
109822462
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
DUF3545
Motif
Other DBs
NCBI-GeneID:
109822462
NCBI-ProteinID:
XP_020244251
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Position
1:complement(31898022..31915557)
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AA seq
701 aa
AA seq
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MARGREALILLIDVGPSTHGVLPEVESVCSMLVQKKLIFGKSDEVGIILFGTKDTDNDLE
KEVGGYEHVVVKRNIKVVDVDAVDILQNLPRGTGNGDFLDAVIVGMDMLIKKYGITNKGK
QRLCLVTDAKHPIKAPSEGTKEDQVHIVCQQMQDHGMRLDCVIIRENSSETASQKIIDEN
DFLLRLFTEKTKAKAIYVSNPTALLGALRTRNISPVTVYRGDLELSSTMKIKVWVYKKTS
EEKFPTLKKFSDKAPPTDRYATHEVKMDFEYKSIENPEKIVPPEQRIKGYRYGPQVVPIS
PAEWEAVKFKPEKSVKVLGFTDASNIMRHYYMKDVNIFIPEPGNTKAIVACSAIARAMKQ
MNKVAILRCVWRQGQGNVVVGVLTPNISCKDNIPDSFCFNALPFAEDIREFQFPSFSNFP
SSWQPNEQQQEAADNLVKMLNLAPDDKEEALQPDFTPNPVLERFYRFLHLKSRLPEAEVP
SLDRSLKRITEPDPEKLSECKPVIENFRTQFELKENPKKKKSSKRAWREKSSVSDEEVGA
DSKVPENGSAKLIENSSPEKVQKIGDLNPVQDFEAMIARRDSSKWVRKAIKEMQDYIYNL
LENSYEGNTYPKAIECLVALRRGCILEQEPKEFNRYLHHIYEKWKTTDLVDFFNLIASKS
ITLISKSEAADSEVTEEEAKNFPVKTELYGDSDSRSQILTS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcggcagggaagcgttgatcttgctcatcgatgtgggcccttctacgcacggg
gttcttcctgaagtcgagagcgtctgctccatgctcgtgcagaagaagctaatttttggc
aagagtgatgaagtggggattatcttgttcggtacaaaagatactgacaatgatctggag
aaggaagttggtggctatgaacatgttgtagttaaacgaaatatcaaagttgtagatgtg
gatgcggttgatatactacaaaatcttcccagagggactggtaatggtgattttttggat
gctgttattgttggaatggatatgttaattaagaaatatggtatcacaaacaagggaaaa
caacgcctttgtcttgttactgatgcaaaacatccaattaaagctccaagtgaaggaaca
aaagaagatcaggttcacattgtttgtcaacagatgcaagatcatggaatgaggctggac
tgtgtcattatcagggaaaattcatctgaaactgcaagtcagaagataattgatgaaaat
gattttttattaagactgttcacggagaagacaaaagcaaaagccatatatgttagtaac
ccaacagcgttgttaggtgctcttcggactcgaaatatatccccagttactgtatataga
ggagatctggagttaagttcaacgatgaagatcaaggtatgggtatacaagaagacatca
gaagaaaagtttcctacattgaagaaattctctgacaaagcacctccaactgatagatat
gccactcatgaagtcaaaatggattttgaatacaaaagcattgagaaccctgagaaaatt
gttcctccagagcaaagaatcaagggttatcgttatggaccacaagttgttcctatatca
cctgcagaatgggaggcagtcaagtttaaacctgagaaaagtgtgaaggtcttaggattt
acagatgcctccaacataatgcggcactattatatgaaggatgtcaacatctttattccc
gaaccgggcaatacaaaagccattgttgcatgctctgccatagcaagagcaatgaaacaa
atgaacaaggttgcaattttgcggtgtgtatggaggcaaggtcaaggaaatgttgttgtc
ggtgtgttgacacccaacatatcctgcaaggataatattccagattcattttgcttcaat
gcacttccatttgcggaggatattcgggagtttcagttcccatcatttagtaattttcct
tcatcatggcaaccaaatgagcaacagcaagaggcagcagacaaccttgttaagatgcta
aatcttgcacctgatgataaagaagaagcattgcagcctgattttacaccaaatccagtc
ttagagcgcttctatcgctttcttcacttaaaatcaaggctgccagaggcggaggttcct
tcccttgacagaagtcttaagaggataactgaacctgatcctgaaaagttatcagagtgt
aaacctgtgattgaaaattttcgcacccaatttgagctgaaggagaatcccaagaaaaag
aaatcctctaagcgagcttggagagagaaatcctcagtttcagatgaagaagtgggtgct
gatagtaaggttcctgaaaatggaagtgcaaaattgatcgagaactcatctccggaaaag
gttcagaaaattggggatttgaaccctgtccaagattttgaagccatgatagctcgcaga
gatagctcaaagtgggttagaaaagcaatcaaagagatgcaggattatatatataacctg
ctagaaaattcttatgaagggaacacttatccgaaggcaattgaatgtttagttgctctt
cgtagaggttgcattcttgaacaggagccaaaagagttcaatcgatatctgcatcacatt
tatgaaaaatggaagactactgaccttgttgacttttttaaccttattgcttctaaaagc
atcaccttgattagcaaaagtgaagcagctgacagtgaagtgactgaggaagaagccaaa
aatttcccagtgaaaactgagttatatggagactcagactccagaagccaaattttgaca
agctga
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