Asparagus officinalis (garden asparagus): 109822475
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Entry
109822475 CDS
T05243
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5 isoform X1
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof03022
Basal transcription factors
aof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109822475
09124 Replication and repair
03420 Nucleotide excision repair
109822475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aof03021
]
109822475
03400 DNA repair and recombination proteins [BR:
aof03400
]
109822475
Transcription machinery [BR:
aof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109822475
DNA repair and recombination proteins [BR:
aof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109822475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
109822475
NCBI-ProteinID:
XP_020244265
LinkDB
All DBs
Position
1:31940816..31948049
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AA seq
70 aa
AA seq
DB search
MVNAIKGLFISCDVPMAQLIINMNSSLPASQKFIVHMLDSTHMFVQPHVAEMIQTKIAEY
RDQNTYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgcaattaaaggccttttcatttcctgtgatgtccctatggcccagttgatt
atcaatatgaattcttctcttcctgcttctcagaagttcattgttcacatgctcgacagc
acccacatgttcgttcaacctcatgttgcagagatgatccaaaccaagattgccgagtat
agggatcagaacacttacgaaaagccagcatga
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