Asparagus officinalis (garden asparagus): 109823021
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Entry
109823021 CDS
T05243
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic-like
Organism
aof
Asparagus officinalis (garden asparagus)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DD_DDX21-DDX50
GUCT
ResIII
zf-CCHC
AAA_30
CMS1
YgbB
zf-CCHC_4
zf-CCHC_5
ERCC3_RAD25_C
Cas3-like_C_2
zf-CCHC_2
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
109823021
NCBI-ProteinID:
XP_020244925
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Position
8:115459597..115468957
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AA seq
747 aa
AA seq
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MSTVPMAGVTLSLPFSDKTHLHFPSSSPHPLALNSNSNSNASSSLAFSRRRLLPLPLSSI
ATPNSVLSEEAFKGLGFELEEKEEEGEGGYASEDGEEAGGDDDDLAVPKLGLPQKLVDSL
LKRGIAELFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKRLIEEDEGRNISRRH
GRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYNVQQNALSRGVDVVVGTPG
RIIDLVNSNSLQLGEVQYLVLDEADQMLAVGFEEDVEVILEKLPSERQSMLFSATMPTWV
KKLARKYLDNPLTIDLVGDQDEKLAEGIKLYALPSTVTSKRSVLSDLITVYAKGGKTIVF
TRTKRDADEVSTALTNSIAAEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIP
NVDLIIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTGSQRRTVKSLERDVGCRFEFIS
PPQIQDVLESSSEQVVATLQGVHPESRQFFLPMAQKLIDEQGTNALAAALAHLSGFSQPP
SSRSLISHEQGWVTLQLIREPGFSRGFFSARSVMGFLSDVYPAAADEIGKIHLIADDRVQ
GAVFDLPEEIAKKLLSMQFSPGNSISLITKLPALQDDGPPSDSYGRFSGRDRRTRGGFRD
RGFRGSRGSGGRDSDSEDDGFRRGRSFRSDNSWSRNSRGSSYDRFAGGRGSGRSSSFGSR
DRGFGGACFNCGRTGHRASECPSKQDY
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactgtgcccatggccggcgtcaccctctctctccccttctccgacaaaacccac
ctccacttcccttcttcttctcctcatcctctcgccctcaacagcaacagcaacagcaac
gcgtcgtcatcgttggcgttctcgaggcgaaggctgctgcctcttcccctgtcctcaatc
gcaacgcccaactctgtactcagcgaggaggctttcaagggtcttggctttgaattggag
gagaaggaggaggaaggagagggtggttatgcatctgaggacggagaagaagccggcgga
gatgacgatgacctcgccgttcctaaacttggcctaccacaaaagcttgttgattctttg
ctcaaaaggggaatcgctgagctcttccccattcagagagccgtattggttcctgctttg
gaaggaagggacctcattgctcgtgcaaagacgggaacagggaagactttggcctttgga
attcccatccttaagcgacttattgaggaagatgaaggacgaaatatctcaaggcggcat
ggccgacttcctagggttcttgttcttgcacctacccgagaattggccaagcaagtggaa
aaagaaataaaagagtctgctccttatcttagtacagtttgtgtctatggtggagtgtct
tacaatgtccagcaaaatgcactttctcgaggtgttgatgtggtggtggggaccccgggt
cggattattgacctcgttaatagcaatagtctccagttgggtgaggttcagtacttagtt
cttgatgaggctgatcagatgcttgccgtaggatttgaagaagatgtagaagttattttg
gaaaagcttccatcagaacgtcaaagcatgctcttttctgcaactatgcctacttgggtt
aagaaattggctcgaaaatatcttgacaatcctctgacaatagatttggttggtgatcag
gatgaaaaattggcagaaggaattaaactttacgcgctaccgtcaactgtaacttctaag
cgtagtgtcctcagtgacctaattacggtgtatgcaaagggtggaaagacaattgttttc
acacggacaaaaagggatgctgatgaagtatccacagccttgaccaacagtatagctgct
gaagcattgcatggggatatatctcaacatcaaagagaaagaacgctcaatggtttccgt
caaggaaagttcaccgttcttgtggctacagatgttgccgctcgtggtcttgatatccca
aatgttgatttgatcattcactatgaactgcctaatgatcctgaaacttttgttcatcgc
tctggtcgtactggaagagctggcaaagaaggcactgctatattgatgttcactggcagt
cagaggagaactgttaaatctctcgagcgtgatgtaggatgtaggtttgagtttataagc
cccccacagattcaagacgtgcttgaatcgtcatcagagcaagttgttgctacattgcaa
ggtgtccatcctgagtcgagacaattttttctcccgatggcccaaaaattgatagatgag
cagggcaccaacgctcttgctgctgctttggctcatttgagtggattctctcaaccacct
tcttcccgttctcttatcagccacgagcagggatgggtgacattacaattgattcgtgaa
ccaggattctcaagagggttcttttctgcaagatctgttatgggttttctttctgatgtc
tatcctgctgccgctgatgaaattgggaaaatacacttgattgcagatgacagggttcaa
ggagcagtttttgatttacctgaggagatagctaaaaaattattgagcatgcaattctcc
cccggaaatagtatatcgctgattacaaagttgcctgccttgcaagatgatggtcctcct
agtgacagttatggccgtttctctggtagagatcgtcgcactagaggaggttttagggac
cgtggattcagaggctcaagaggctcgggtggccgtgactctgatagtgaagatgatgga
tttcgtcgtggacgaagttttagaagtgacaatagctggtctaggaactcccgaggaagc
agttatgatcggtttgctggtggaagagggtctggccgctcatcttcatttgggagtaga
gacagaggctttggaggcgcatgtttcaactgtggaaggaccgggcacagggcttctgaa
tgcccaagcaaacaagattattaa
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