Asparagus officinalis (garden asparagus): 109823029
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Entry
109823029 CDS
T05243
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aof
Asparagus officinalis (garden asparagus)
Pathway
aof04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aof00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
109823029
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aof04040
]
109823029
Ion channels [BR:
aof04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
109823029
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
Motif
Other DBs
NCBI-GeneID:
109823029
NCBI-ProteinID:
XP_020244935
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Position
8:35631923..35637715
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AA seq
724 aa
AA seq
DB search
MQQPHEPSPVTQRAESSRVQPASPLRQPLRPRSSTSSTSSPTPSPALTAAAADAAAPPAP
LLLVASPAECHACTQPAASAFHSSASCGSASLLRLHAGSSLLPIQNTPTAXARRPSRRVA
PSVLDPRSKRVQNWNRLVLLRARPPSWSTLVLLHASVGRDGAPCLVMDGRGMAAALAGVR
ARAWTRCHVAHVWVQLRVAYVSRESLMVGWGKLVWDPKLIVRHYLRSPKWFWFDAFVILP
LPQIVFLWSLPRLLVEEEIGLIITIILLMLLFQYLPKVYHSVCVLKRMQKATGYIFGTIW
WGFGLNLIAYFMASHVVGGCWYVLAIQRMTSCFQQQCQKNNNCDLMTLACYKSPCDPNPL
LSSSVGAPSCNYFKTSVAFHNLTTCLHGEGPFLYGIYDSARQVVASNSVAVKILYPIFWG
IMILSSFGNCFEPTSHWLEVIFCMVVILSGLMLFTLLIGNIQVFLHVVMARKRKMQLRSR
DMEWWMSRRQLXXXXXXQRWAAMRGEDEMDIVKDLPEGLRRDVKRHLCLDLIRKVPLFHK
LDDLILDNICDRVEHLVFSKNEKVIREGDPVQRMIFIVRGQLQSSQQRSKGMVATCMIGP
GNFLGDELLSWCLRRPFIDRLPSSSATFECIEPAEAFGLDANHLRYITEHFRYRFANESI
KRTARYYSSNWRTWAAVNIQLAWKQYKRRTRAIVILPSEIGDNERRLRLYAAMFMSIRPH
DHLE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccccacgagccatcccccgtcacccaacgggccgaatcctcgcgcgtccaa
cccgccagcccgctccgccaaccgctacgtccgcgatcctccacctcttcaacctcgtca
ccaactccgagcccagcactaacggccgccgccgccgatgccgcagctcccccagcgccc
ctcctcctcgtcgcctcccccgccgagtgccacgcctgcacccagccggccgcctccgcg
ttccactcctccgcctcctgcgggtccgcctccctcctacgtctccacgccggctcctcc
ctcctccccatccaaaacacccccaccgccnnggcccgccgcccgagccgccgcgtcgct
ccctccgtgctcgacccgaggagcaagcgggtccagaactggaaccggctcgtcctgttg
cgcgcgcggcctccctcgtggtcgacccttgttcttctacacgcctccgtcgggagggac
ggggcgccgtgcctcgtgatggacggaagggggatggcggcggcgctggccggggttcgc
gcacgtgcgtggacacggtgccatgtggcgcacgtgtgggtgcagctgagggtggcgtac
gtgtcgagggagtcgctgatggtcgggtgggggaagctggtgtgggaccccaagctgatc
gtgcggcattacttgaggtcgcccaagtggttttggttcgatgccttcgtgatcctgccc
ctgccccagattgtgttcctatggtcgttgccgagattgttggtggaggaggagattgga
ctcataattacaataattttgctgatgttattgtttcagtacctcccaaaggtttatcat
agtgtttgtgtgctgaagaggatgcagaaggcaactggctacatatttggaacaatttgg
tggggatttggcctcaatctcattgcatatttcatggcttctcatgttgttggtgggtgc
tggtatgttcttgcgatccaacgcatgacctcctgcttccagcagcagtgccagaagaac
aataactgtgatctcatgacactggcctgctacaagagcccatgcgaccctaatccccta
ctatcatcatcagtaggtgcaccatcatgtaattattttaagacatccgtcgcattccac
aatcttacaacatgtctacatggtgaagggccattcttatatggcatttatgactcagct
cgccaagttgtcgccagcaactcagtcgctgttaagatactttaccctatattttggggc
ataatgatcctcagctcctttggaaattgtttcgagcctaccagccattggttagaagtg
atattttgtatggttgtcattctaagtggtttgatgctcttcaccttgttgattggaaac
attcaggtatttcttcatgtggtcatggcaaggaaaagaaagatgcagctgagatctcga
gacatggagtggtggatgagcaggagacaactgnnnnnnnnnnnnnnnnnncagagatgg
gcagcaatgagaggggaagacgaaatggacatcgtcaaagatttgccagaagggttaagg
agagatgtaaagcgccatctctgccttgatctcataagaaaggtgccgctgttccacaaa
ttggacgatcttatccttgacaacatatgtgatagagttgaacatctagttttttccaag
aatgaaaaggtaataagagaaggagatcccgttcaacgaatgatcttcatagttcgaggg
caattacaaagcagccaacaaagaagcaaaggaatggtagcaacatgcatgatagggcct
ggaaattttctaggagatgagctcctatcttggtgtcttcgtcgcccatttatagatcgg
ttgccgtcttcatccgcaacttttgagtgtatagagccagcagaagcttttggcttggac
gcaaatcatctaagatacataacagagcatttcaggtacagatttgctaatgaaagcatc
aaaagaacagcgaggtactattcatcaaattggaggacgtgggcggctgtcaatatacaa
ttggcatggaagcaatacaagaggaggacaagggcaattgtgatattgccttcggaaatt
ggcgataatgagagaagacttcgattatacgccgcaatgttcatgtcgattcgacctcat
gatcaccttgaatag
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